Paenibacillus sp. JDR-2: Pjdr2_3849
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Entry
Pjdr2_3849 CDS
T00977
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pjdr2_3849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pjd03400
]
Pjdr2_3849
Enzymes [BR:
pjd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Pjdr2_3849
DNA repair and recombination proteins [BR:
pjd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pjdr2_3849
Prokaryotic type
Pjdr2_3849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
UPA_SH3BP4
Motif
Other DBs
NCBI-ProteinID:
ACT02479
LinkDB
All DBs
Position
complement(4389993..4390685)
Genome browser
AA seq
230 aa
AA seq
DB search
MDFQLNNDWAELLHSEMDEPYFKQMEEQLGELYETKTVYPKAEHVFNALSFTPYEQTRVV
IIGQDPYHGPGQAHGLSFSVQEGIAIPPSLRNIYKELQQDIGCPIPQHGSLASWAKQGVL
LLNTVLTVEEGQPNSHQKLGWERFTDRIIRKLNEREEPVVFILWGKHAQDKAAFIDTGKH
PVISSAHPSPLAARKGFFGSRPFSRVNEYLRSLGYTEIDWKLPEQPEENE
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagctgaacaatgactgggcagagctgctgcacagtgagatggacgagcct
tacttcaagcagatggaagagcagcttggtgagctttatgaaacaaagaccgtatacccg
aaggccgagcatgtttttaatgcgctttcgtttacgccttatgagcagacgagagttgtc
attatcggacaggatccttatcatggcccgggtcaggcgcatgggcttagcttctcggta
caagaggggattgctataccgccttctttgagaaatatctataaagagctgcagcaggat
atcggctgtccgattccgcagcatggctctcttgcgtcgtgggccaagcaaggggtattg
cttctcaataccgtcttgaccgttgaagaggggcagcccaattcgcatcagaagctgggc
tgggaacggttcaccgaccggattatccgcaagctgaatgaacgggaagaaccggttgtc
tttattttatggggcaagcatgcccaggataaagctgcctttatagatactggtaagcat
ccggttatctcatcggcgcatccaagcccgttggcggcaaggaaaggtttttttggcagc
cgtccgttctcgagagtgaacgagtatttgcggagccttggttatacggagattgattgg
aaactgcctgagcagccggaagaaaatgaataa
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