Paenibacillus sp. JDR-2: Pjdr2_3891
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Entry
Pjdr2_3891 CDS
T00977
Name
(GenBank) UDP-N-acetylmuramoylalanine/D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd00470
D-Amino acid metabolism
pjd00550
Peptidoglycan biosynthesis
pjd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pjdr2_3891
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pjdr2_3891
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pjd01011
]
Pjdr2_3891
Enzymes [BR:
pjd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Pjdr2_3891
Peptidoglycan biosynthesis and degradation proteins [BR:
pjd01011
]
Precursor biosynthesis
Amino acid ligase
Pjdr2_3891
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GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
ACT02521
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Position
complement(4436107..4437528)
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AA seq
473 aa
AA seq
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MNHPATYRDRRVVVLGLARSGVSVAKVFHALGAEVIVNDKKERELCPEADELTALGISVL
CGYHPDDLVTSETALLVKNPGIPYTASPVQQAEAHGVEIVTEVEVAYWLSAAPIIGITGS
NGKTTTTTWIGKLLGEAGLNPIVAGNIGIPLCEAAAEATKDNWIVAELSSFQLKGTSSFR
PRIALLLNIAETHLDYHGGMEDYVASKAKLFANQTADDVAVLNWDDATCRAIADQLAAKL
LPFSLYVRLDQGICIEPPFERGKDSDKEHMIVWRKEDGTEQAILPVSALGLPGRHNAGNA
LAAIAACLAAGVAPEAMLPALQGFRGVEHRLEYAGEFNGVNYYNDSKATNPMATTMSVGS
LGAPIILIAGGLDRGSDYMELLPVFRDRLKGLVTLGQTREKLGKVAELAGLTNVRLVEPE
EDAESTLRRAVREAAGLAEPGDIVLLSPACASWDMFTSFEDRGRIFKESAHTL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatccggcgacttatcgggatcgccgcgtcgttgtattaggacttgccagaagc
ggcgtgagcgtagcaaaagtgttccatgctcttggagcagaagtgattgtaaacgataaa
aaagaacgtgaactatgccccgaagcggatgaattaactgctttgggcatttctgtgcta
tgcggttatcatccggacgatctcgtaacaagcgaaacggcattgctggtgaaaaacccg
gggatcccgtacaccgcaagtccagtccagcaggcggaggctcatggcgtggagattgta
acggaggtcgaggtcgcttattggctgtcggcagctccgattatcggaattaccggttcg
aacggtaagacgacaacaacgacctggatcggcaagctgcttggcgaggcgggcttaaat
cccatcgtggcgggcaatatcggcataccgctctgcgaagcggcagccgaagcaacgaag
gataactggatcgtggcagagctcagcagcttccaactgaaagggacctcgtcattccgt
ccgcgtattgctctcttgctcaatattgccgagacgcatctggactatcatggcgggatg
gaggattacgtcgcatcgaaggcgaagctgttcgccaaccagacggcggacgatgttgcc
gttctgaactgggacgatgcgacctgcagagctattgctgaccaactggccgcaaagctg
ctgccgttctcgctttacgtgcggcttgaccaagggatctgcatcgaaccgccatttgaa
cgcgggaaagattcggataaagaacatatgatcgtatggcgtaaagaagacgggacggag
caggcgattctgccggtatccgcgcttgggcttccgggccgccataacgctggaaacgcg
cttgcggcaattgctgcctgcctggcagcaggcgttgctcctgaagcgatgctgccggcc
ttgcaaggctttagaggcgtagagcataggcttgagtatgcaggcgaattcaacggcgtc
aattattataatgattccaaggctacaaatccaatggcaaccacgatgtcggttggctcc
ttgggcgcgcctattatccttatcgccggcgggcttgaccgcggctccgattatatggag
cttcttcccgtattccgtgaccggctgaagggattggtaacgctgggtcaaacaagagag
aagctggggaaggtagcggagcttgcaggtttaacgaatgtgcgattggtcgaacctgag
gaggacgccgagtctactttgcggagggccgtacgggaagctgccggactagcggagcct
ggagatattgttttattgtcgccggcctgcgcaagttgggatatgtttacatcctttgag
gatcgaggacgcatttttaaagaatcggcgcataccttgtaa
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