Paenibacillus sp. JDR-2: Pjdr2_3893
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Entry
Pjdr2_3893 CDS
T00977
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd00300
Lysine biosynthesis
pjd00550
Peptidoglycan biosynthesis
pjd01100
Metabolic pathways
pjd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pjdr2_3893
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pjdr2_3893
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Pjdr2_3893
Enzymes [BR:
pjd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Pjdr2_3893
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GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ACT02523
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Position
complement(4438621..4440000)
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AA seq
459 aa
AA seq
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MCGARAYKGEPVRIAGVSTDTRSIQPGQLFVPLVGENFDGHSYVAQALQQGAAAALWETK
RELPQELADAPLLFVRDTLKALQQLATSYREELYVRVIGITGSNGKTTTKDMVAAVLGTA
YKVHKTAGNLNNHIGLPLTVLQLDEETDAAVLEMGMSGFGEIELLTNIARPDVAVITNIG
DAHLLQLGSREGIAKAKLEIAHGLHSGGILLYNGDEPLLAAELAGMSLPEGTQLQTFGLG
ESNDWSAADIEVGAVSSAFAVKRKGQDTVSAPYTIPVPGQHNVSNALAAIAIGRRFGISE
ENIRNGLIGLELTGMRIQPVKAHNGAMILNDAYNANPTAVRAAIDLVGQLSGFRRKWIVL
GDMRELGPEEESLHFETGAYITPDKADAVITFGPLSEHTSAGALSQFPAEAKGTAIVHFD
DKGKLGEWLREQVEPQDLVLVKGSRGVRMEQIVQTLEAR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggcgcaagagcctataaaggcgaacccgtccggattgccggcgtcagcacggat
acgcgcagcattcagccgggtcagctgttcgttccgcttgtcggagagaactttgacggt
cacagctatgtggcacaggcgcttcagcaaggggctgcagccgccttgtgggagacgaag
cgtgaattgccgcaggagctggcagacgcgcctctattgtttgtaagggatacgctgaag
gcgctgcagcagctggcaacttcctacagggaagagctgtatgtccgtgttatcggcatt
acgggcagcaatggcaaaacaacaacaaaagatatggttgctgccgttcttggaacagct
tataaagttcacaagacggcaggcaatctgaataatcatattggcctgccgctaaccgtt
ctccagcttgacgaggaaacggatgcggcagtccttgagatgggcatgagcggctttggc
gagattgagctgcttacgaatattgcccgtccggatgttgcggtgattacgaatatcggc
gatgcccacctgcttcagctaggctcccgcgaagggatcgcgaaagcaaagctggagatt
gcgcatgggcttcattcgggaggtattcttctctataacggcgatgaaccgctgcttgcg
gcagaacttgccggaatgagcttgcctgaaggcacgcagcttcagacctttggccttggg
gagtccaacgactggtcggcggctgatatcgaggttggcgccgtatcttctgcctttgcc
gttaagcgcaaagggcaggataccgtatcagcgccttacaccataccggtacccggccag
cataacgtcagcaacgcgcttgcggccatcgcgattggacgccggttcggcatttcggag
gagaatatccgaaatggcttgatcggtcttgaattgaccggcatgagaatccagccggtg
aaggcgcataacggcgcaatgattctgaatgatgcgtacaacgccaatccgaccgccgtg
cgcgcagcgattgatctagtcggccagctgagcggcttccggcgcaaatggatcgttcta
ggcgatatgcgggagcttggtccggaggaagaatcgcttcacttcgagacgggggcttat
attacacctgacaaggctgatgccgtcattacgttcggaccattgtcggagcatacgtcg
gcaggggctttgtcgcaattcccggcggaagcaaagggaacggcgattgtacattttgat
gataaagggaagcttggagaatggttgagagagcaagtagagcctcaggatctcgtcctg
gtcaaaggctcgcgcggtgtgcgcatggaacagattgtccaaactttggaagcgaggtga
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