Paenibacillus sp. JDR-2: Pjdr2_3896
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Entry
Pjdr2_3896 CDS
T00977
Name
(GenBank) Peptidoglycan glycosyltransferase
KO
K08724
penicillin-binding protein 2B
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd00550
Peptidoglycan biosynthesis
pjd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pjdr2_3896
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pjd01011
]
Pjdr2_3896
Peptidoglycan biosynthesis and degradation proteins [BR:
pjd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Pjdr2_3896
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
Beta-lactamase2
MutL_C
Motif
Other DBs
NCBI-ProteinID:
ACT02526
LinkDB
All DBs
Position
complement(4443683..4445938)
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AA seq
751 aa
AA seq
DB search
MVKRIKLRTLLFGGIITLLFVVLIGRIYYVQVVKGDFWYEKAKTRWAAEEKLLAKRGTIT
DRDGNMLAMDSVAYDIAVNPDMIHKLNIADEVAAGLHTLLGKPEADLLKIVTAQKDNGDY
YQQREIHEEGWKIDKELADKVVKFRQELYDKYKTKDVGIYLFEDQKRYYPRHSMASQLLG
YVTKEGQAASGIESFYNDKLKGEDGELKYEKDGKRVQLAEGEVEYKPAQDGQDIALTIDM
DIQNYVEKALEDINQKYHPKSITAIAADPNTMDILAMANYPTFDPNTYWDMSYENAYNHS
IKSLYEPGSTFKIVTLAAAVQEGIFNPNATYHSGSIAVPGAPVKDINKVGWGTITYLEGL
KRSSNVAFVKLGWEQLGGEKLMDYINRFGFGQKTGVELGGEASGAINVNLSIPSDIARAS
FGQGKVQVTAIQQIAAVAAVANGGKLMEPHIVKQIYDPNTKTTVKTQPKVVRQVISQEAS
KKVGEYLEQVVSDQEIGTGRNAYIEGYRVAGKTGTAQKVINGKYSQDKFVVSFIGYAPVE
NPKIVLYIVVDEPNDPKAGGGAVAAPAFKDVVYKSLKHMGIAPDIKVTENGKKEVTVSVP
KLASLTVSQAKTQLKSRGLNVEVVGGGTKVIQQVPASGASVHPAQKVYLITEQRDKLKIP
DMTGISLRDALEIASVLDIRVTVKGEGYVVSQKQVTKNGERLIELTLSPQTGGANSQTDS
TDSTDVEDAMKNTDEGTNSAEDQKVDTANTQ
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaacgaattaaacttcgcacgttgttgtttggagggataataaccctccttttt
gttgttctaatcggaagaatctattatgtgcaggtggttaaaggagacttttggtacgaa
aaggccaagacgagatgggcggccgaagagaagctcttagcgaagagggggacgattacg
gacagggacggcaacatgctcgccatggattccgttgcttacgatatcgcggtaaacccc
gatatgattcataagctgaatatcgccgacgaagtagcagcgggattacatacattgctg
ggcaagccggaggccgatctgctcaagatcgttacggcgcaaaaggataacggcgactac
tatcagcagcgcgagattcacgaggaaggctggaagatagacaaggagcttgccgacaag
gtcgttaagttccgccaagagctttacgataaatacaagacgaaagacgtcggcatttac
ctctttgaagatcagaagcgttactatcctcgtcattccatggcttcgcagctgctgggg
tacgtgacgaaggaaggccaggcggcttcggggattgagtctttctataacgacaagctg
aaaggcgaagacggggagctgaagtacgaaaaggatggcaaacgcgtccagctcgcggaa
ggcgaagtggaatacaagccggcgcaggacggccaggatatagctcttacgatcgacatg
gacattcagaattacgtcgagaaagcgcttgaggatatcaatcagaaatatcatccgaag
agtattaccgcgattgccgcagatccgaatacaatggatattctggcgatggccaattat
ccgacatttgatccgaatacctattgggacatgagttacgagaatgcgtataaccactcg
atcaagtccttgtatgagcccggttcaacgttcaagattgtaacgctggctgcagccgtt
caggaagggatcttcaacccgaacgcgacgtatcattccggttccatagcggttccgggc
gctccggtaaaagacattaacaaagtcggttggggtacgatcacttatctggaaggctta
aagcgctccagtaacgttgcgttcgttaagctaggctgggagcagcttggcggagagaag
cttatggattatatcaaccggttcgggttcggccaaaaaacgggtgtcgagcttggcggt
gaagcatcgggtgcgattaatgtgaacttatccattccttccgatattgcccgcgcttca
tttggtcaaggtaaggtgcaagttacagccattcaacagattgcggcggttgcggcggtt
gcgaacggcggcaagctgatggaaccgcatattgtgaaacagatttatgaccctaatacc
aagacaaccgtaaagacgcagcctaaggtggtaaggcaggtcatttcgcaggaagcatca
aagaaggtgggcgaatacctggaacaggtcgtatcggaccaagagatcggtaccggccgt
aatgcttatatcgaaggctatcgggtagccggcaagacgggtacggcgcaaaaggtcatt
aacggaaaatattcgcaagacaagttcgtcgtatcttttatcggctacgcacctgttgag
aatccgaagatcgtcctttatatcgtcgttgacgagcctaacgatccgaaagccggcggc
ggcgccgttgcggcacctgcctttaaggatgttgtatacaagagtttaaaacatatgggt
attgcaccggatattaaagttaccgagaatgggaagaaagaagtaacggtatccgtgccg
aagcttgctagcctgaccgtatctcaagcaaaaacgcaattgaaatcgcgcggcttgaac
gttgaggtagtcgggggaggaacaaaggttatccagcaggtgcctgcatcgggagcctcc
gttcatccggcccagaaggtatacttgattacggaacaacgggacaagctgaaaatcccg
gatatgacgggtatatcattgcgcgacgcgctcgaaattgcatccgtgctggacatccga
gtaacagttaagggcgaaggttatgtcgtctcgcagaaacaggtcacgaaaaacggcgaa
cgtcttattgaactcactctttcgccgcagacgggtggggcgaatagtcaaaccgattct
accgattccaccgatgtagaggatgccatgaaaaatacggatgaaggaacgaattcggct
gaagatcagaaagtcgatacggccaatacgcaataa
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