Paenibacillus sp. JDR-2: Pjdr2_4202
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Entry
Pjdr2_4202 CDS
T00977
Name
(GenBank) transcriptional regulator, GntR family with LacI sensor
KO
K02103
GntR family transcriptional regulator, arabinose operon transcriptional repressor
Organism
pjd
Paenibacillus sp. JDR-2
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pjd03000
]
Pjdr2_4202
Transcription factors [BR:
pjd03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Pjdr2_4202
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
GntR
Peripla_BP_4
HTH_DeoR
Peripla_BP_6
HTH_41
HTH_Crp_2
Rrf2
HTH_11
HTH_24
HVO_A0261_N
RPA_C
TrmB
Fe_dep_repress
Phage_rep_O
Motif
Other DBs
NCBI-ProteinID:
ACT02829
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Position
4812379..4813455
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AA seq
358 aa
AA seq
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MSEKEPGLPKYQLVKDYVLAQIENQEISKDDRIPSESEFSKMLNVSSITVRKALSELVNE
GVIYRVRGKGSFVAAGQTAVAEKASNLVAFVISGVEMYDSSYMQIMKGIQSFLGKHDCKL
IIEFVENDFEQERELILRLIQSDIRGLLIYSSDPVGAKSYLNDIRKKSIPFVMLDRSPAG
YPVNVVTCNNHDGAYEAVEYLIRNGHKQIGFAAYDFHLSPEVDRYNGYNNAMTNASLPVN
KKLLYLEKELDYDMLARQIQEGEITALFCTNDKRALEVLEQLTSRGIRIPDQISLMGFDD
FESSKFAKVALSTVKQYFDVLGYESAKLLLEISEGNSYGNKKVMLPTSLIIRDTVRPV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaagagcccggactacctaagtatcaacttgttaaggattacgtgctggca
cagatcgagaatcaggaaatttccaaggatgaccgcatcccaagcgaatcggaattttcc
aaaatgttaaatgtaagctccataacggtccgaaaggcgctttccgagctagtgaacgaa
ggagttatttaccgcgttcggggaaaaggaagctttgtggccgccggccagaccgccgta
gccgaaaaagcctccaatctagttgcttttgttatctcgggcgttgaaatgtacgacagc
tcctatatgcagattatgaagggtattcagtccttcctcggcaagcatgactgcaaattg
attatcgagttcgtggaaaatgacttcgaacaggaacgcgagcttattttacggttaatc
caatccgatattagaggacttcttatttactcctcggatccggttggggcgaaaagctat
ctgaatgacattcggaagaaatcgattccattcgttatgctggaccgctcgccggctggt
tatccggttaatgtcgtaacttgcaacaatcacgacggcgcctatgaagccgttgaatat
ttaatccggaatggtcataagcagatcggatttgccgcttacgatttccatctcagtccg
gaagtagaccggtacaacggctataacaatgcaatgactaatgcttccctgcccgtgaac
aagaagcttctctatctggaaaaggaattggactatgatatgcttgccaggcaaattcaa
gagggagagattacggccctcttttgcacgaatgacaaacgcgccctcgaagtactcgag
cagttgaccagccggggaatccggattccggatcagatttcgcttatgggctttgacgat
ttcgaaagctccaaattcgccaaggttgctctgagtacggtgaagcaatattttgatgtc
cttggttacgaaagcgctaagctgctgctagaaatcagcgaaggaaattcttatggaaac
aaaaaagtcatgctgcctaccagtctaatcatccgggataccgttagaccggtttaa
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