Paenibacillus sp. JDR-2: Pjdr2_4208
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Entry
Pjdr2_4208 CDS
T00977
Name
(GenBank) transcriptional regulator, GntR family with LacI sensor
KO
K02103
GntR family transcriptional regulator, arabinose operon transcriptional repressor
Organism
pjd
Paenibacillus sp. JDR-2
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pjd03000
]
Pjdr2_4208
Transcription factors [BR:
pjd03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Pjdr2_4208
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
GntR
Peripla_BP_1
Peripla_BP_4
HTH_11
HTH_DeoR
HTH_24
HTH_Crp_2
HTH_28
Rrf2
MarR_2
LexA_DNA_bind
HVO_A0261_N
Fe_dep_repress
Sigma70_r4_2
WHD_DprA
TrmB
Sigma70_r4
HTH_20
HTH_IclR
HTH_23
HTH_41
FaeA
MarR
AbiEi_4
FeoC
EutK_C
CobW_C
RepL
Motif
Other DBs
NCBI-ProteinID:
ACT02835
LinkDB
All DBs
Position
complement(4819042..4820139)
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AA seq
365 aa
AA seq
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MKEKSMPKYIQLKKEILVWLDTGKLQPNEQMPSENEISEQFGLSRQTVRQTLGELEKEGR
LYRLQGKGTFVAEARDSESRVETQTIGLITTYISDYIFPHIVRGTEAAIRAKGYRLLLSS
TDNDKGRERESLSMLTSQPLSGLIIEPTKSAEGNPNLAYFLALNNRRIPYVMINARYPEI
SCPSLIIDDEEGGSTAAQHLLELGHRRIVGFFKTDDQQGVLRLKGFMRAHQQEGCLLQPE
FVVAYRTEEKAKKPIAEAARLLELPEEERPTAFVCYNDELALQLLEVIRQAGLSVPQDIS
IVGFDDSPLATASEVKLTTLVHPKAEMGEDAARMLFELIESSGALIPESKTYKPSLIIRE
STRKM
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaatcaatgccgaaatacattcagctcaagaaagaaatattggtatggctg
gatacgggaaagctgcagcccaatgagcagatgccgtcggagaacgaaatatccgaacag
ttcgggctaagccggcaaacggtccgtcaaacgcttggggagcttgagaaggaaggcagg
ctgtaccgcctgcaaggaaagggtaccttcgtagcggaggcgcgggatagcgagagccgt
gtggaaacccaaacgataggccttataacgacgtatatttcggattatatcttcccgcat
attgtccggggaacggaagcggcgattcgcgccaaaggctaccggctgctgctctccagc
acggataacgataagggcagggaacgggaaagcctgtcgatgttaacgagccagccgctt
agcggtctgattatcgaaccgaccaaaagcgcggaagggaacccgaatctcgcttatttt
ctcgcgcttaacaaccggcgaattccttatgtcatgataaacgccaggtacccggaaatc
agctgtccttccctgattattgacgatgaggaaggcggcagtacggccgctcagcatttg
ctcgagctgggacatcgccggatcgtcggatttttcaagacggatgaccagcagggtgta
ctgcgcctgaaaggcttcatgcgcgcgcatcagcaggaaggttgtctgcttcagcctgag
tttgttgtggcttaccggacggaggagaaagcgaagaagccgattgcggaagcagcgagg
ctgctggagcttcccgaagaggaacggccaacggcatttgtctgctacaacgacgagtta
gccttgcagctgctagaggttatccgtcaagccggcctatccgtaccgcaggatatatct
atcgtcgggtttgacgattcgccgcttgcgacggcctccgaagtgaaactgacaacgctg
gttcacccaaaggcggaaatgggagaggacgccgcaaggatgctgttcgagctaattgaa
agcagcggggctttgattccggaatctaaaacatacaagccaagcttgattattagggaa
tcgacccgcaagatgtaa
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