Paenibacillus sp. JDR-2: Pjdr2_4236
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Entry
Pjdr2_4236 CDS
T00977
Name
(GenBank) ABC transporter related
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Pjdr2_4236
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pjd02000
]
Pjdr2_4236
01504 Antimicrobial resistance genes [BR:
pjd01504
]
Pjdr2_4236
Transporters [BR:
pjd02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
Pjdr2_4236
Antimicrobial resistance genes [BR:
pjd01504
]
Gene variants
Macrolide resistance genes
Transporters
Pjdr2_4236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
DUF5906
AAA_29
AAA_15
Dynamin_N
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
ACT02863
LinkDB
All DBs
Position
complement(4850285..4851763)
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AA seq
492 aa
AA seq
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MSMIHVQNLTFSYPSSFDPIFENVSFQIDTDWKLGFIGRNGRGKTTFFNLLLGKYEYNGN
IISSAEFNYFPYPVPDKSRLTYEILEEICPHAEDWEFLREISYLDVDAEVMYRPFETLSN
GEQTKVLLAALFLNEGQFLLIDEPTNHLDTHARKMVSKYLKRKKGFILISHDRNFLDGCV
DHILSINRANIEVQSGDYTSWKLNFDRRQEHEEKTNERLQKDIGRLQQSSKRSANWSNQV
EASKNGTTNSGSKLDKGFVGHKAAKMMKRAKNLESRQNKAIEEKSTLLKNVEKTESLHLE
PLEYISKELIQLTDVSVRYDGELVNKPITFKVEAGDRVVLDGKNGSGKSSILKLILGKPL
RHTGTLNVGSGLVISYVQQDTSHLKGKLSDFIEENQINEPIFKSILRKMDFDRIQFEKDI
SHYSGGQKKKLLIAKSLCEKAHVYIWDEPLNFIDVYSRMQVEELIKSFNPTMIFVEHDQT
FQEEVATKTVAL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgattcatgtacaaaacctgacattttcatatcctagcagctttgatcctatt
ttcgagaatgttagctttcaaatagatacggattggaagcttggatttattggccgcaac
ggtcgaggcaagacgaccttcttcaatcttctattagggaaatatgaatacaacggtaat
attatctcttcggcagaatttaattattttccatatccggttccggataaaagcagactc
acctatgaaatattggaagagatatgtccacacgcagaagattgggaatttcttcgggaa
atttcttatttagatgtcgatgctgaagtgatgtacagaccattcgaaacgttatccaat
ggggaacaaacgaaggttttattggctgcgcttttcttgaacgaagggcaattcttatta
attgacgagccgaccaatcatttggatacccatgctcgaaagatggtttctaaatatcta
aaaaggaaaaagggattcattttaatctcgcatgatagaaactttttggatggctgtgtt
gaccatattttgtccataaacagagccaatatagaagttcaaagcggtgattatacttct
tggaagctgaattttgatagacggcaggaacatgaggaaaaaacgaatgaacgtttgcaa
aaagatattggaaggctgcaacaatcttcaaagcgttccgccaattggtccaatcaagtg
gaggcctccaaaaacggtacaacaaattccggttctaaattggacaaggggtttgtggga
cataaagctgcaaaaatgatgaaacgtgcaaagaacctggagtcaaggcaaaataaagct
attgaagagaagtcaacgctgcttaaaaacgtggaaaaaacggagtcgttgcatttagag
cctttagaatacatttctaaagaactcattcagttaacggacgtgtctgttaggtacgat
ggtgaattagtgaacaagccaataacttttaaggttgaagcgggagaccgagtagtgctt
gatggcaagaatggcagtggaaagagtagtattctaaaattaattctagggaagccactc
cggcatacaggtactttgaacgttggttcaggtcttgtcatttcttatgtacagcaagat
acctctcatttaaagggaaagctgtctgactttattgaagaaaatcaaattaatgaaccg
atatttaaatccattctacgtaagatggattttgaccggatccagtttgaaaaagatata
tcccactattccggcgggcaaaagaaaaagttgcttatagctaaaagtttatgcgaaaaa
gctcatgtatatatttgggatgagccgctaaactttattgatgtttattcacgaatgcaa
gttgaagagcttattaaaagctttaatccaacaatgatttttgttgagcatgaccagaca
ttccaagaggaagttgcaacgaaaacggtagccttatag
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