Paenibacillus sp. JDR-2: Pjdr2_4665
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Entry
Pjdr2_4665 CDS
T00977
Name
(GenBank) S-layer domain protein
Organism
pjd
Paenibacillus sp. JDR-2
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_59
SLH
Bact_surface_Ig-like
Glyco_hydro_59_C
FIVAR
3keto-disac_hyd
CE2_N
Big_3_2
InlK_D3
Enas
Big_4
Motif
Other DBs
NCBI-ProteinID:
ACT03279
LinkDB
All DBs
Position
5343230..5349310
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AA seq
2026 aa
AA seq
DB search
MKISNPLQKSLSFVLALVLAIPLISPAKAAAAESAPTMVTIDGDAADTNPANTFKGYGLV
SANNTSRLLLDYKEEHPDQYWEMMNLLFNQDTGAGINDIKIEMGNDSNTSSGTEPSTKRS
ADEEANVRRGAGYIFAADAKTINPDIKVSILRWTQPGWVQPWSDGNTDPSQPATLAAYER
MYKWYKDTAIAIHNTYGYDLDYINPDRNETGTPNVNFIKWFANRMRSDAEFPNYNKIKII
ASDENTSLNIPTRMLADPDLMNAVDVMAYHYNMATSADYLKVNEQNQKEVWYSEGVAPQT
FAKYRANSDEKFGGVASALDVAGRFIGMYTQGKRTHYMFQPAIGAFYSGAPYSSKELIGA
RDPWSGYYVPDVGIQTVMQFTQFAANDWMYIPDASLGVIGSRGNSEMDGNAAGAEYNRLA
FVSPDKKDFSVVMVNDSDRVAEYQFDVKKNIANAGNPLQVWETRGADAGQAYDANWYKQL
ANLASTDNGDVYSYTLTVKPHSMVSVTSTTVNPNTGNPRTPYTRNNDIPKQSVLDVDGSN
PAVLYEDDFEYADYPADSNGLSYMERRGGTPRYTADQGGAFEVYPGIGQDGSNGMKQIVY
SGNKPGTWATTPFSYTVLGDERWANYETSIDFKMDQDPTHTGDNYVAIGMRHKLNGTTSD
SESGYKFRIYADGTWRLIRLTATVASGTLTSFDASKWHRISIKGASQFITASLDGEVVTT
YNDTASGAPLSGQVMIQTSLQQSVFDNLKVEAVNGYVPYATERVDDLDSRVTYHEGSFPW
SHSISGGAGRLNRTISTSGTSILFSSTSKTESTLNRWYMVKNEGNTAAWSSNSTNAWAGE
TGSYASLTFNGTGISVYGQGQGTNAVVRMDVYLDDFGTGYNHDSSKRVVTSKAYANNSSS
QLIYQISGLTPGVHNVKIVKTAAASGSGNYLSIEKAVVTADAADPTSFELPFTGTGFRLV
GDTGAATIDVAVDDKPVGTNVAIPAATVNRTDSYSYEGLSYGPHTLKVAVKDGSFSIDAI
DILGEVYGTVSKAALADFITEVSEYTEADYMPTEWGAFTAALEAAQAILADEAATQYKVD
LAFNNLKDASSALKLRIQPVAVTGTYPTIVATRSDQAVTGLPNTVKVTLADGTTDADAAV
HWLNNTPERFNTPYTSVQVTGEIVGGNNLSITVQVEVVPDNLVYFIDPGISDSTTTPPYN
AIKALVGDALLNNTADQPSTGDTVWGHTPTDANYKYKALTGAVVATDKSQTGVYGADTIN
NPLGYVLPLASGDYTITSFHRDWWNNTNRTMDITLSYKDADNNVVTLPVRTGLIAGPDGT
TVTYDFTLPVDSTVTYSINNTYSGNQAALISYLGVAKRVADPADVQALETAKSIIEAAEY
SVFKVKANSEDEVKAWLADAIQGLDGLSATGASIDNITLDAFQAATEDTNGSFSFTVQLS
KGLAKETAAYEGIIAAKDTVKPVISLNGEAVVNLPTGAEYTDAGATALDDWDGDLTGSIV
TTITNDVNDGTTLDTSVAGTYTFHYNVSDAAGNAADEVTRSVIVSEDPDTVKPVITLLGD
ATVNLANGASYTDAGATASDDRDGDISDQIITTITNNINDGTTLDTSVAGNYTFHYNVSD
AAGNAADEVTRTVIVAERVQPPVVTNPTPSEPTVPATTQVLTSGDLQNAVSGTITVTVAN
GKNTVQFPSNVIQLVGDNTLKLVMDGMTLSFTKDDLAGIMGAVTGAKAAGAKISFTAVKV
PNGEVNSLINNQEVNSTVKLTTASTVYDFRLSVIAADGTIVPVSTFDEPLKLTFTVDPNA
NPDLLGVYYIAADGALQYVGGTLADGVMTAYVKHFSQYAVLEYDKSFTDVSPAFWAHDII
QQIAAKHIITGVSDTLFNPEDNVTRAEFTAMIARALGLEEVDGSAIFLDVKADAWYAGYI
GAVSKAGIVMGRSSIAFAPNDAITREEMAVMAVRAYEYVKGKQAEVEKDIASFADKSSIS
AWAQDAASLAQELGLIKGRSNNLFAPQALMTRAESAQVMGNLIGQL
NT seq
6081 nt
NT seq
+upstream
nt +downstream
nt
atgaagataagcaatccgcttcaaaaaagcctttcatttgttctagcgcttgttctcgct
attccattaatctcccctgccaaggctgctgccgccgaatcggcgccaaccatggttacc
attgacggcgacgccgccgataccaaccctgccaatacgttcaaaggctacggccttgtg
tccgccaacaatacatcccgcctgctgctggactataaggaagagcatcccgaccagtac
tgggaaatgatgaatctgttattcaatcaggacaccggagctggcatcaacgatattaag
atcgagatgggcaacgactccaacacctcctccggcactgagccctccaccaagcggtct
gctgacgaagaagccaatgtccgccgcggagccggttacatatttgcagccgatgccaaa
acgatcaatcccgacattaaagtcagcatcctccgctggacgcagccaggctgggtgcag
ccatggagcgacggtaatacggatccttcccagcccgctacactagccgcctacgaaaga
atgtacaagtggtacaaagataccgctattgccattcataacacctacggctacgacctc
gactacattaacccggaccgcaacgagacaggcactcctaacgtcaacttcatcaagtgg
ttcgcgaaccgcatgcgcagcgacgcggaatttcctaactacaacaagatcaagattatt
gcttccgacgaaaatacttccctcaacattccgacccgcatgctggcggacccggatctg
atgaacgccgtggacgtgatggcttatcactataacatggcgaccagcgccgactacctg
aaagtcaacgagcagaaccagaaggaagtctggtacagcgaaggcgttgcgcctcagacg
ttcgccaagtaccgtgccaattcggatgaaaaattcggcggcgtcgccagcgcgctggac
gtggccggccgcttcatcggcatgtatacgcaaggcaagcgaacgcattacatgttccag
cctgcgataggcgctttctacagcggcgctccgtacagcagcaaggagctaatcggtgca
agagatccatggtccggctactacgtgccagacgtgggtattcagacggtcatgcaattt
acgcaattcgccgccaatgactggatgtacattccggacgcaagtcttggcgtaatcggc
agccgcggcaacagcgagatggacggcaatgcggccggagcggaatataaccgccttgct
tttgtcagcccggataagaaggacttctccgtcgtaatggttaatgacagcgaccgggtg
gcggaataccaattcgacgtgaagaaaaatatcgccaacgccggcaacccgctccaggtg
tgggaaacacgcggtgccgacgccgggcaggcttacgacgccaactggtacaagcagctt
gctaaccttgcttcgaccgacaatggtgacgtctattcgtatacccttacggtcaaaccg
cattccatggtcagcgtgactagcacgacggtcaacccgaatacaggcaatccgcgcacg
ccatatacgcgcaataacgatattccgaagcaatccgtgttggatgttgacggaagcaat
cctgccgtcctgtacgaggatgatttcgaatatgcggattatcctgcggacagcaacggc
ctaagctacatggagcgtcgcggaggtacgcctcgttataccgccgaccagggcggtgcc
tttgaggtgtatccgggcatcggccaggacggctccaacggcatgaagcagatagtctac
tccggcaacaagccgggtacttgggcaacaacgccattctcgtacaccgtgcttggcgat
gaacgttgggcgaactatgagacatccattgatttcaagatggatcaggacccgacccat
accggagacaactatgtcgcgatcggcatgcgccataagctgaacggcactacctccgat
tcggaatccggctataagttccggatctatgcggatggaacatggcgcctgatccgcttg
accgctacggttgcaagcggcactttaacaagttttgatgcttccaaatggcatcgtatc
tccattaaaggagccagccaattcattaccgcatccctagacggcgaagttgtaacaacc
tacaacgatacggctagcggagctccgctctccggtcaggtcatgattcaaacaagcctg
cagcaatccgtttttgacaacctgaaggttgaagcggttaacggttatgtgccttacgca
acggaacgggtcgatgatctggattcccgcgttacctaccatgaaggcagcttcccatgg
tcgcatagcatatccggcggtgccggccggttgaaccggacgatctccaccagcggaaca
agcatcctgttcagcagcacctccaagaccgagagcacattgaaccgttggtacatggtc
aagaatgaaggcaataccgcggcttggagctcgaacagcaccaatgcatgggccggcgag
acgggcagctatgcctccctcacctttaacggaaccggcatctccgtatacggccaaggg
caaggcaccaacgcggttgtccggatggacgtgtacttggacgattttggaacgggctat
aatcatgactcttcgaaaagagtcgttacgagcaaagcctacgccaacaacagcagcagc
cagcttatctatcagatcagcggcctaacgccaggcgtgcataatgtcaaaatcgtcaaa
accgccgcggcatccggcagcggcaactacctttccattgagaaagccgtcgtaaccgcc
gatgcagcggatcctacttcttttgaactgccgtttaccggcactggcttccgtctcgta
ggcgataccggagcagcaacgattgatgttgcggtagatgataagcctgttggaactaac
gttgctattcctgccgccacggtcaaccggacggactcttattcctatgaaggcttgagc
tatggccctcatacgctgaaggtcgcagtgaaggacggcagcttctccatcgatgccatc
gatattttgggagaggtgtacggaacggtatccaaagcggctctcgccgacttcatcacc
gaggttagcgaatatacggaagcggattacatgccaacggaatggggagcttttacggcg
gcattggaagctgctcaagcgattctagccgacgaagcggctacgcaatataaggtagac
cttgcctttaacaacttgaaggatgcatccagcgccctcaagctgcggatacaaccggtg
gccgtcacgggtacgtacccaacaattgtcgcaacccgatccgaccaagccgttacggga
cttccgaacacggtaaaagttacgcttgctgacggaacaacggatgcggatgcagcggtt
cattggctgaacaacacgccggagcgcttcaatacaccatacaccagcgtacaagtgacc
ggcgagattgtcggcggcaacaatctgtccattaccgtgcaggtcgaagttgtgcccgac
aacctagtctatttcatagatcccgggatatcggatagtacaacaacgccgccgtataat
gccattaaagctttagtgggagatgctctgcttaataatacagccgaccagccttccaca
ggcgataccgtctggggacatacgcctaccgatgcgaactataaatataaggctcttaca
ggtgcagtcgttgcaacggataaaagccagaccggggtttacggcgccgacaccataaac
aacccgctcggctacgtccttccattagcctcaggcgactataccattacttccttccat
cgcgactggtggaataacacaaacaggacgatggatataaccctgagctacaaggatgca
gacaacaatgttgtcaccttgccagtacggactggtcttatcgctggaccagacggcaca
acggtgacctatgattttaccctgcctgtcgacagcacggtcacttattcgattaacaac
acttatagcggcaaccaggcggcattgatcagctaccttggtgttgcgaagcgggttgca
gaccctgcggatgtgcaggctctcgagactgcaaagagtattatcgaagcagctgagtat
tcggtatttaaagtgaaagctaactctgaggatgaagtgaaggcatggcttgcggatgcg
atccaagggctggatgggttgagcgcaaccggcgcttctatcgataacatcacgctcgat
gccttccaggctgcaaccgaagataccaacggcagcttcagctttaccgttcaattgtcg
aaggggcttgcgaaggagacagcagcttatgagggaattattgcagcgaaagataccgtt
aaaccggttatctccttgaacggagaagcggtcgttaacctgccaaccggcgccgaatat
accgatgcgggagctaccgcgctggatgattgggacggcgatcttactggaagtatcgtt
acgacgattacgaacgacgtgaatgatggtactacgctggatacttccgtagctggtact
tataccttccactacaacgtatctgatgctgctggcaatgcggcggatgaagtgactaga
tccgttattgtgagcgaggatccggatacagttaagccggttatcacattgcttggtgat
gccacagttaatctggcgaatggagctagctacaccgatgctggtgctaccgcatctgat
gaccgggacggagatatttcggatcagatcataacgacgattaccaataacatcaatgac
ggaacaacgctggatacttccgtcgctggcaattacaccttccactacaacgtatctgat
gctgccggtaatgctgccgatgaagtaactagaacggttattgtagcggagcgggtacaa
ccgccagtcgtaacgaatccaactccttccgaaccgacagttcctgcaactacacaggtt
ctgacgagtggagatctgcaaaatgcggtttcgggtacgattaccgtcactgtagctaac
ggtaagaatacagttcagttccctagtaatgtcatacagcttgtgggcgacaacaccctg
aagcttgttatggatggcatgaccctttcatttacgaaggatgatctggccgggatcatg
ggagctgtaacaggtgcaaaagcagctggagcaaaaatcagtttcactgccgttaaagtg
ccgaacggtgaagtgaatagtctgattaacaaccaggaagttaatagcacagtgaagctg
acaacagcaagcactgtctatgatttcagattgtcggtcatcgcagcagacggcacgatt
gtaccggtatcaactttcgatgaaccattgaagcttacgttcaccgttgatcctaacgcg
aatcctgatctgcttggcgtgtattacatcgcagcagacggagctttgcaatatgttggc
ggcacattagcagacggtgtgatgacagcttatgttaagcatttctcgcaatatgccgtg
cttgagtacgacaaatcgttcaccgatgtcagcccagccttctgggcacatgatatcatt
caacagatagctgccaagcatattatcacaggtgtcagcgacaccctgtttaatccggaa
gacaatgtcactcgcgccgaatttactgctatgattgctcgtgcactaggccttgaagag
gttgatggatcagcaatcttcctcgacgtgaaagccgacgcttggtacgccggttatatt
ggggctgtcagcaaggcgggtatcgtaatggggcgcagctccattgcgttcgcacctaac
gatgctattactcgtgaggaaatggcagttatggctgttcgggcttatgagtatgtgaag
ggtaagcaggctgaggttgagaaggatattgcttcatttgcggataagagcagcattagt
gcttgggcacaggatgctgcgagccttgcgcaggagctcggcttaattaaaggcagaagc
aataatctatttgctccgcaagcgcttatgacccgcgctgaaagtgcgcaggttatgggg
aatttgattggtcagttataa
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integrated database retrieval system