Paenibacillus sp. JDR-2: Pjdr2_4869
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Entry
Pjdr2_4869 CDS
T00977
Name
(GenBank) Peptidoglycan glycosyltransferase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd00550
Peptidoglycan biosynthesis
pjd01100
Metabolic pathways
pjd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pjdr2_4869
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Pjdr2_4869
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pjd01011
]
Pjdr2_4869
Enzymes [BR:
pjd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Pjdr2_4869
Peptidoglycan biosynthesis and degradation proteins [BR:
pjd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Pjdr2_4869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ACT03481
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All DBs
Position
complement(5590813..5592876)
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AA seq
687 aa
AA seq
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MHDDPQKREITNRRHFSFRLNFFFFIVFGLFSVLIIQLAILQFVEGPKLSAQGSQKSTRS
VKIAPIRGNIYDSSGNAIAYSTSTQSLYFTISPDFKDGDAEAIAAKLAEIFKEKGDKAPE
KQMTVEDIIRQMDLDFRRNTISTPRRIKTGLTEQEIAYFSEHKSEFKGIDIVEESVRNYT
NDTVAVQLVGYLKKFKGVRESLDFYKDKGNEDDPQLQYLDDEDVGFDGLEYMYQDILRGK
NGLKTYPVNNAERIIGPVQITNPQKGDDLYLTINRNVQLTTEQAIVDQIKKISTSTSKAE
RAEYAKIGFAVAMEVNTGKIVSMASMPDYDPNIWAGGKISNEDYKNFSSVLNNGTIREVF
PHYETDKERNQHPSSLVPPGSTMKPLSILIGLNEKLFTTTSTYFDNGAFFFGAKGHEVRI
GNASNHAYGLLDPASAIAHSSNPFMAKMVGNNLYEKYGKKGVDVWDNYMKQFGLGVLTGS
GLRGESKGTIDYYHEQQTASSQSALVRASFGQQARYTPLQLVQYVSMLANHGKRMKPQFV
NQIKDADGKVVQTFKPEVLNTVDFPESYWNEIEDGMSRVNVQGFDGVTYTYERKTGTAQS
DVAGRRADNAVFIAYAPRENPKLAVAVVIPDGEFGGWGAAPIARKIFDAYDYEVGLNGTP
GKLKDQANNTANAGTDGTTGTTDTTQQ
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
ttgcatgatgatccgcagaaacgggaaataacgaatcgtcgtcatttttcgtttcgtttg
aactttttcttctttatcgtatttggactatttagcgttcttattattcagcttgctatc
ttgcagtttgtcgaaggtccgaagctgagcgcgcaaggcagccagaagagcaccagaagc
gtcaagatcgcgccgatccgcggcaatatttacgattcgtcaggcaatgcgattgcttat
tcgacatcaacgcaatcgctctattttacgatctcgcccgatttcaaagacggggatgcg
gaagcgattgccgcaaagctggctgagatatttaaagaaaaaggcgataaagctcctgaa
aaacaaatgacggttgaggatattatccgtcagatggacttggatttccgccggaacacg
atttctactcctcggcggataaaaaccggcttaacggagcaggaaattgcctactttagc
gagcacaagtcggaattcaaagggatcgatatcgtcgaggaaagcgtgcgtaattatacg
aatgatacggtagccgtgcaattggtcggctatttaaagaaattcaaaggtgtacgcgaa
tcgcttgatttctacaaggataaaggaaatgaagacgatccgcagcttcaatatctggat
gacgaggacgttggttttgacggacttgaatatatgtaccaggatattttgcgcggcaaa
aacggcctgaagacctatccggttaacaacgcggaacgcattattggccccgtacagatt
accaacccgcaaaagggcgatgacttgtacctgaccatcaaccgcaacgtgcaattaacg
acggagcaggcgattgttgaccagatcaaaaaaatcagcacgtcgacaagtaaagcggag
cgtgccgaatacgcgaagatcggctttgctgtcgcgatggaagtaaacaccggtaaaatc
gtctcgatggcgagcatgccggattacgacccgaatatatgggcgggcggcaagatcagc
aacgaagattacaaaaacttctcgtctgtcctaaacaacggtacgatcagagaggtgttc
cctcactacgaaaccgacaaagagcggaatcagcatccgtcgtccctggttccgccgggc
tcgacgatgaagcctttatccattcttatcggcttgaatgaaaagctgtttacgacaaca
agcacgtatttcgataacggcgctttcttctttggcgccaaaggccatgaggtgcgaatc
ggtaacgcctcgaaccatgcttacggcttgctggacccggcatcggcgattgcccattcc
tccaacccgtttatggcgaagatggtgggcaacaatctgtatgagaaatacggcaaaaaa
ggcgtcgatgtgtgggataactacatgaagcaatttggacttggcgttttgaccggcagc
ggtctgagaggcgaatccaaaggcacgatcgactactatcacgagcagcaaacggccagt
tcccaatccgcattggtgcgggcatcgttcggccagcaagcgcgttatacaccgctgcag
cttgtgcaatacgtatccatgctcgcgaaccacggaaaacggatgaagccgcaattcgtc
aaccagataaaagacgcggacggcaaagtggttcagacgtttaagccggaagtactgaac
acggttgatttccctgagtcttactggaatgaaatcgaggatggcatgtcacgggttaac
gttcaaggctttgatggcgttacgtacacgtacgagagaaaaacaggtacggcacagtct
gacgtagccggccgccgtgcggataatgcggtatttatcgcttatgcgccaagagaaaat
ccgaagctggccgtagcggttgttattccggacggtgagtttggcggctggggcgcagct
ccgattgcccggaaaattttcgatgcttacgattacgaggttggcttgaacggtacgccg
ggcaagctgaaggatcaagccaataatacggcaaacgcgggtactgacggtacaacgggt
acgaccgatacaactcaacaataa
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