Paenibacillus sp. JDR-2: Pjdr2_5014
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Entry
Pjdr2_5014 CDS
T00977
Name
(GenBank) glycoside hydrolase family 43
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd00520
Amino sugar and nucleotide sugar metabolism
pjd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
Pjdr2_5014
Enzymes [BR:
pjd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
Pjdr2_5014
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
Glyco_hydro_32N
Glyco_hydro_130
Methyltransf_FA
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
ACT03625
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Position
complement(5738176..5740599)
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AA seq
807 aa
AA seq
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MSGWQMKRSLIGIGIAVVLATGGGGIWLLTQKQDEQEQSREAITMDRTYRNPMTLDQEWE
DYGIGDPYVLRYNGKYYLYCSTKDWRVGIKAWSSDDLVNWSYEGLVTEEPVSEGAYAPEV
VYWNGSFYMYTSPAGKGHYVLQSDSPTGPFKVKTDNLGLTIDGSVFIDDDAKWYFTHAES
GGIMASSMIDPYTIEAGDKLNTSLGHWTEGSMIIKRGGRYFITYTGNHVFSKGYRVNYAV
GHESPTGLYTIPDNNPIIISTDKDFNGLGHSATVLGPDMDSYYIVYHNLVGSSAEGPPVR
KLNMDRLTFNGDKMSVLGPTHDAPVPAPALPAFRDPLGGSPSADKWQSPEISGTDAAWVA
TKPTGDRFTAEYNVILGSESGELETIFSYTSADDYRSIRINPAEHSISLRDAAADKEVQK
ASLPEGMDFSKLHAVRVEADQSGTRVYWDGLLLIDNAEFTAKAGQIGYAWTGGLKPELQY
TAFSNEAGGSSDNKMIKQVPGTMEAVHAAASGNNEVTIHHEGTPDGSYSAELTGKASELA
FPVYVHSDGDYMLAAMVSDASAGSTLEVEAGGVKRSVKLKAEEFVTEDDSSEWMKVPLGT
YPLKQGLQWLTLSRGKGNPDIRFIETIEAAAPEGEQQVAFDPDSTFGYWQEESGTVGLQL
AGDNSMIFGGDTRWTDMEVGVEITQAEAAEDEASILLRTTMESSFRDQVADSFIGYELTF
RNGRIILKKVSYEVNQELTSGVLELGSGKAHPIRIKLKGPSIQVFDGDNDEPVLTWTDRN
AFLHGRIGLRASSSDWQFGNITVNTKS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatggcaaatgaaacgatccttgatcggcattggcatcgcggtcgtactcgca
acaggcgggggagggatttggttgcttacgcaaaagcaggatgagcaggaacaatcaaga
gaggctattacgatggaccggacctatcggaatccgatgacgctcgaccaggaatgggag
gattacggcatcggcgatccttacgtgctgcgctacaacggcaaatattatttgtactgc
agcacgaaggactggcgggtcggcataaaagcatggagctccgacgatctggtgaattgg
agctacgaagggctggtaacggaggagccggtaagcgaaggcgcttatgcgccggaagtg
gtgtattggaacggttccttctatatgtacacatctccagcgggtaaagggcattatgtg
ctgcaaagcgacagtcccacagggccgttcaaggtgaaaaccgataatctgggcctcacg
attgatggctccgtctttatcgacgatgatgccaaatggtatttcacccatgcggaatcc
ggcggcattatggccagcagcatgattgatccttatacgatcgaagcaggcgataagctg
aacacgtcattggggcattggacggaaggctcaatgattattaagcggggcggcagatat
ttcataacgtataccggcaatcacgtgttctccaagggctatcgcgttaattacgcggta
gggcatgagtcgccaaccggcctgtatacgattcctgacaataatccgattatcatctcg
acggacaaagattttaacggactggggcatagcgcaacggtgcttggtccggacatggac
tcctattatatcgtttatcacaatctggtcggcagttcggccgaaggacctccggtaagg
aagcttaatatggaccgtctaacgtttaacggggacaaaatgtccgtgcttggcccaacg
catgatgcgccggtaccggctcccgcgcttccggcgttccgcgatccgcttggcggcagt
ccaagcgcggataaatggcaatcgcctgaaatctccggtactgatgcagcttgggtcgca
acgaagccaacgggggaccgttttacggcggaatacaacgttatcttaggcagcgaaagc
ggtgaactggagaccatcttctcttatacaagcgcggatgattatcgcagcattcggatc
aatccggcggagcattccatttcgttaagggatgcggctgcggataaagaagtgcagaag
gcctctttacctgaagggatggatttctccaagctgcatgccgtgcgggtggaagcggat
cagagcggaacaagagtgtattgggatggactgctgctcatcgataacgcggagtttacg
gcaaaagccggtcaaatcggttacgcctggacgggcggcttgaagccggagctgcagtat
acggcattctcgaatgaagcgggcggcagcagcgacaacaaaatgatcaagcaggtgccc
ggcacgatggaggccgtacacgccgcagcgtccggcaataacgaagtcactattcatcat
gaaggaacacctgatggaagctactcggccgagttaaccggcaaagcttcggagcttgct
ttcccggtatacgtccattcggatggggattatatgctggctgcgatggtatcggatgct
tcggcgggttctacgcttgaggttgaagcgggcggcgtaaagcggtccgtaaagcttaag
gcggaagagttcgtaaccgaggacgattcctcggaatggatgaaggttccgctcggaacg
tatccgttgaagcagggcttgcagtggctgacgctttccagaggaaaaggaaatccggac
atccggttcatcgaaacaatcgaggcggcagcgcctgaaggagagcagcaggttgctttt
gaccctgactcgacctttggttattggcaggaagagagcggtaccgtaggcctgcagctg
gccggcgataattccatgatttttggcggggatacccgctggacggatatggaggttggc
gtggaaataacgcaggcagaagccgcggaagacgaggcgtctattctgctgcggacaacc
atggaatcatcctttcgcgatcaggttgctgattcttttatcgggtatgagcttaccttc
cgcaatggcagaatcatcctgaagaaagtcagctacgaagtgaatcaggagcttacctcc
ggcgtgctggagctggggagcggcaaagcccatccgattcggatcaagctgaaggggcca
agcatccaggtatttgacggggacaatgacgagcccgttctgacctggacggaccggaat
gccttcctgcatggacggatcggacttcgcgcgagctcttcggactggcaattcggcaat
atcacggtaaatacgaaatcataa
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