Paenibacillus sp. JDR-2: Pjdr2_5140
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Entry
Pjdr2_5140 CDS
T00977
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pjdr2_5140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pjd03400
]
Pjdr2_5140
Enzymes [BR:
pjd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Pjdr2_5140
DNA repair and recombination proteins [BR:
pjd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pjdr2_5140
Prokaryotic type
Pjdr2_5140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
ACT03751
LinkDB
All DBs
Position
complement(5908304..5909500)
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AA seq
398 aa
AA seq
DB search
MEAINKEEAKAYFSRELLTWYRRIKRDLPWRMNQDPYRVWVSEIMLQQTRVDTVIPYYER
FMNKFPTVRALAEAPEPEVLKCWEGLGYYSRARNLQAGAREVVERYGGIVPDDKVAVAGL
KGVGPYTTGAIMSIAFNRPEPAVDGNVMRVLSRYFCLEDDIAKPATRVGIEKLAVSLIPE
GAAGDFNQALMELGALVCTPKSPSCLPCPVMEHCEARLAGRETELPIKTKAKPPRPEKRV
AAIIAGTGVYEGKILVRQRPETGLLAQMWELPHLLVPKEQEQIVDAAPETDGSTAAAGEW
LTRSMEEETGLLVRPERWFMDADHVFSHIHWKMRIYLADLGALAGAGEAAAGASLAAETA
AAYEAGGKQGEYRWIGPEDMETLAFPNLFIRILREYWT
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgattaataaggaagaggcaaaagcttacttcagccgcgagctgctcacctgg
taccggagaatcaagcgggatctgccatggcggatgaatcaggatccataccgcgtatgg
gtatcggaaattatgctgcagcagacccgggtggacacggttattccttactacgagcgg
tttatgaataaatttcctacggtacgcgcgcttgccgaagcgccggagccggaagtgctg
aagtgctgggaaggactcggttattattcgcgcgcccgcaatttgcaggctggagcacgc
gaagtcgtcgaacggtacggcggtattgtgcctgatgataaagtggcggtggcgggactt
aaaggcgttggcccttatacaaccggcgcgattatgagcattgcctttaaccgtccggag
cctgcggtagacggcaacgtcatgcgggttctatcaaggtacttctgccttgaggacgat
attgcgaagcctgcgacacgcgtcggtattgaaaagcttgcggtatccctcattccggaa
ggggcggccggggatttcaaccaggcgctgatggagcttggagcacttgtctgtacgcca
aaatcgccaagctgcctgccctgtccggtgatggagcattgcgaggctcgtcttgccggc
cgcgaaacggagctgccgatcaagacgaaggcgaagccgcctcgtccggaaaaacgggtt
gccgcgattatcgccggtaccggcgtgtatgaaggcaagattctagtgcgccagcgtccg
gagaccggattactcgcgcagatgtgggagcttcctcatttgctcgtgccgaaggagcag
gagcaaatcgttgatgccgctcccgagacagacggcagtacggcggccgcgggcgagtgg
ctgacgcggtcgatggaagaagagacaggcctcttggtccgtccggagcgctggtttatg
gatgcggatcatgtatttagccatattcattggaaaatgagaatttacctggctgacctt
ggtgcacttgcgggggccggagaagcggctgccggcgcaagcctggctgcggagactgcg
gccgcttatgaagcaggcggcaagcagggcgaataccggtggattggtcctgaggatatg
gaaacattggcttttccgaatttattcattcgcatattgcgggaatattggacgtaa
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