Paenibacillus sp. JDR-2: Pjdr2_5182
Help
Entry
Pjdr2_5182 CDS
T00977
Name
(GenBank) ROK family protein
Organism
pjd
Paenibacillus sp. JDR-2
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ROK
MarR_2
HTH_IclR
HTH_24
FGGY_N
TrmB
HTH_Crp_2
BcrAD_BadFG
HTH_5
Phage_rep_O
SMC_ScpB
Motif
Other DBs
NCBI-ProteinID:
ACT03793
LinkDB
All DBs
Position
5942383..5943546
Genome browser
AA seq
387 aa
AA seq
DB search
MKVTTTGDLTLIKKINTSIVLEAVLKQAPLSRAQISELTGLNKATVSNLVQDLIDSDLVV
EIGPGESSGGRKPVMLLFNGKAGYAVGIDLGVNYIRGVLADLEGNVIAERKRSLKKHQLE
FTLKELVQCIEELIGKAPASPYGIVGIGIGVPGIVDDQGSILFAPNLEWRHVELQQMLEE
QFQLPVTIDNEANAGAQGEQKYGIGRGIAHQIYVSVGIGIGTGIILNKELYKGATGFSGE
LGHLSIEYNGKPCRCGNEGCWELYASENALLEQAAPLGFDSLEDLLDAAEAGNEEVRALF
YKIGEYMGAGISNIVNVFNPDVVIIGNRMSRAKTWLEEAVQSSVTRRTLPYHRERLRILF
AELQDQSAVRGAAYYAISKFFTKIKTG
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagtaactacgacaggcgatttgacccttattaaaaaaataaatacatccatcgtg
ctggaagccgtgctgaaacaagcccccctctcgcgggcgcaaatttccgagcttacgggg
ctgaacaaagcaactgtctccaatttggttcaagatttgatcgacagtgatcttgtggta
gagattggtcccggggaatcaagcggcggacgtaagccggttatgctcttatttaatggg
aaggccggatatgccgttggaatcgatcttggcgttaactatattcgcggggtgcttgcc
gaccttgaaggcaatgtaattgccgagcgtaagcgaagcctcaagaagcatcagcttgag
tttaccctgaaggaactggttcaatgtatagaagaactaattggcaaagcgcctgctagt
ccgtatggaatcgtgggaatcggcattggcgtgccgggaatcgtggatgatcagggctct
atcctgtttgccccgaacctggaatggcggcatgtcgagcttcagcaaatgctggaggaa
caattccagctgccggttacaatagataatgaagcaaacgctggcgcgcaaggcgagcag
aaatacggaattggccgcggcatcgcccatcagatctatgtcagcgtcgggattggtatc
ggtacgggcatcattcttaataaagaattatataaaggagctaccggattctccggcgag
cttgggcatctgtccattgaatataacggcaagccttgccgatgcggcaatgaaggctgc
tgggagctttatgcttccgaaaatgcgctgcttgaacaagctgctccgcttggcttcgat
agtttagaggatctgcttgacgcagctgaagctggcaacgaagaggttcgagcgttattc
tataagattggcgagtacatgggggcgggtatttcgaacatcgtcaatgtgttcaacccc
gacgttgtgatcatcggcaatcgcatgagccgggcaaaaacatggcttgaggaagcggtg
caatcctccgttacccgccggacattgccttaccatcgcgagcggcttcggattcttttc
gcagagctgcaggatcagtcggccgtacgaggcgccgcgtattatgcgatcagcaagttt
ttcacgaaaatcaaaaccggataa
DBGET
integrated database retrieval system