Paenibacillus sp. JDR-2: Pjdr2_5206
Help
Entry
Pjdr2_5206 CDS
T00977
Name
(GenBank) alpha-L-arabinofuranosidase domain protein
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd00520
Amino sugar and nucleotide sugar metabolism
pjd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
Pjdr2_5206
Enzymes [BR:
pjd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
Pjdr2_5206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-L-AF_C
ASD1_dom
Motif
Other DBs
NCBI-ProteinID:
ACT03817
LinkDB
All DBs
Position
complement(5978948..5980426)
Genome browser
AA seq
492 aa
AA seq
DB search
MNKAVVHADWSIGTINKNIYGHFAEHLGRCIYEGMWVGEDSEIPNTDGIRNDVIEALRNL
KVPVLRWPGGCFADEYHWKDGIGPRETRKRMVNTHWGGVVENNHFGTHEFFRLCELIDAE
PYICGNVGSGSIQEMSEWMEYMTFDGDSPMANLRRQNGREEPWKLKYFGVGNENWGCGGE
MLPEHYADLYRNFQTYVRQYGDNKLYKIAGGASSDDYRWTDVLMSKAERFMSGLSLHHYT
VPGVWADKGSATEFDENDWFVTMKKAEYMDELLTRHSTVMDRYDPSKRVGLIVDEWGTWF
NVEPGTNPGFLYQQNTMRDALVAAINLHIFHKHCDRVQMTNIAQMVNVLQAVVLTEGDKI
LLTPTYHVLEMYNVHQDAEALAIHGQFGKVNADGKELDQVGVTASKKDGVIHVSLYNLHP
SEQSEISLELRGAEGSFNCTGRLLAADAIQAHNTFEDPSKVSVKAFYEAKIENGKLSLNL
PAASVVTLRLEQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcggtagtacatgcagactggtcgatcggcacgattaacaagaacatctac
ggccatttcgccgagcatctcggcagatgtatttatgaaggcatgtgggtaggggaagat
tccgaaattccgaacacggacggcatccgtaacgacgtgatcgaagcgctgcgcaatctt
aaggtacctgttctgcgctggccgggcggctgttttgccgatgaatatcactggaaagac
ggcattggtccccgcgagactcgtaaaagaatggttaatactcactggggcggcgttgtg
gaaaataaccatttcggcacgcacgagttcttccgtctatgcgagctgattgacgccgag
ccttatatctgcggcaacgtgggcagcggttcgatacaggagatgtccgaatggatggaa
tacatgacgtttgacggcgattccccgatggcgaatctgcgccggcagaacggccgggaa
gagccttggaagctgaaatattttggcgtgggcaatgagaactggggatgcggcggcgag
atgcttccggagcattacgcggatctgtaccgcaacttccagacgtatgtccgccaatac
ggcgataacaagctgtacaaaatcgcaggcggcgcaagctccgacgattaccgctggacc
gacgtgctaatgagcaaagcggagcgcttcatgagcggtctgagcctgcatcactacacg
gttccgggcgtgtgggccgataaaggctccgctacggaatttgacgagaacgactggttc
gtaacgatgaagaaagccgaatatatggatgagcttcttacccgccacagtacggtaatg
gaccgttacgacccgagcaaacgcgtcggcttgatcgttgacgagtggggcacttggttt
aacgtggagccaggcaccaacccgggcttcctgtatcaacagaatacgatgcgcgatgcg
cttgttgcggcgattaacctgcatattttccataagcattgcgatcgcgtacaaatgacc
aacattgcccaaatggttaacgttctgcaggcggtggttctgacggaaggggacaaaatc
ctgctgacgcctacgtaccatgtgcttgaaatgtacaatgtccatcaggatgccgaggcg
ttggcgattcatggtcaattcgggaaagtaaatgccgacggcaaagagctggatcaagtt
ggcgttaccgcgtccaagaaggacggcgttatccatgtcagcctgtacaacctgcatccg
tccgagcaatcggagatcagtcttgagcttcgcggcgccgaaggcagcttcaactgcacg
ggcaggctgctcgcagcggatgcgattcaagcacataacaccttcgaggatccttccaag
gtgagcgtgaaggcattctacgaagcgaagatcgagaacggcaaattgagcctcaatctg
cctgcggcatcggtagttacgcttcgtttggagcaataa
DBGET
integrated database retrieval system
