Paenibacillus sp. JDR-2: Pjdr2_5330
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Entry
Pjdr2_5330 CDS
T00977
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd02010
ABC transporters
pjd02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Pjdr2_5330
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Pjdr2_5330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pjd02000
]
Pjdr2_5330
Transporters [BR:
pjd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Pjdr2_5330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
TPR_2
Motif
Other DBs
NCBI-ProteinID:
ACT03941
LinkDB
All DBs
Position
complement(6124578..6125576)
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AA seq
332 aa
AA seq
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MSEYRRRSASVAIAAILIVVAVVGIYKWAASQRTEKTVDIIVTVKAKSSAIDFWKVLITG
VEDAANEFGANVTVIGPPSETEIDTQTEQLKQAIRQKPDAIVMAATDYNRLVPVAQQIVK
AGIKLITVDSRINSDDALSFIATDNIAAGEKAGEEMAKLLPESSSSKVAIMSYVYGTSSQ
LEREKGVRQWLEGHSHIEVASTLYSEGRLEKAYELTKELLSEDPGIKGIVGLNEPSTVGA
GRAIRDLGLSGKVKLVGFDSSVDEVKLIEGGVLQATIVQKPYNMGYLSVKTAIEAVRGKK
VPKLIDTESVIINKDNMYTEQNQKLLFPFVGE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtatagacgcagatcggcctctgtcgccattgccgcgattcttatcgtggtt
gctgtcgttggcatctataaatgggcggcaagccagcgaacggagaagactgtcgatatc
attgttacggtaaaagcaaaaagctcggcgattgatttctggaaggtgctgatcaccgga
gttgaggatgcagccaatgaatttggcgccaatgtgacggttattggacctccgtccgag
acggagattgacactcagacggaacagctgaagcaggcaatccggcagaagccggatgcg
atcgtgatggccgctaccgattataaccggctggttcctgtcgcccagcagatcgttaag
gcgggcatcaagcttattacggtagattcccgcattaacagcgatgatgcgctcagcttt
atcgcaacggataatattgcagccggagagaaggccggagaagagatggccaagctgctg
ccggagtcctcttcctcgaaagtcgccattatgagttatgtttacggaacctcgtcacag
cttgaacgggaaaagggtgtgcggcagtggctggaaggacattcacatattgaggtagca
agtacgctctatagcgaaggccggctcgagaaggcttatgagctgaccaaggagctgctc
tccgaggatcctggcattaaagggattgttgggttaaatgagccttccaccgtgggtgcc
ggccgagcgatccgggatcttgggcttagcggcaaagtaaagcttgttggcttcgacagc
tcggtggatgaagtgaagctgattgaaggcggcgtgctgcaggcaaccattgtccagaag
ccttacaatatgggctacctcagcgtaaagacggctattgaagcggtgcggggcaagaag
gtgccgaagctgatcgatacggaatcggtcattatcaacaaagacaatatgtacacggaa
caaaatcagaagctgctcttcccctttgtgggagagtag
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