Paenibacillus sp. JDR-2: Pjdr2_5363
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Entry
Pjdr2_5363 CDS
T00977
Name
(GenBank) transcriptional regulator, AraC family
KO
K13530
AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
Organism
pjd
Paenibacillus sp. JDR-2
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pjd03000
]
Pjdr2_5363
03400 DNA repair and recombination proteins [BR:
pjd03400
]
Pjdr2_5363
Transcription factors [BR:
pjd03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Pjdr2_5363
DNA repair and recombination proteins [BR:
pjd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
Pjdr2_5363
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
Ada_Zn_binding
HTH_AraC
DUF1409
HTH_23
FAM91_N
Sigma70_r4
CAP_GLY
ArsD
TraE
Motif
Other DBs
NCBI-ProteinID:
ACT03973
LinkDB
All DBs
Position
6160589..6161158
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AA seq
189 aa
AA seq
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MGNTETTNIPEDKWLAVLSNDGSYDGQWYYGVTTTGIFCRPSCKSKPPNRSHVRIFQTSR
DALSERFRPCKRCKPVQQQLPDEEWEVQARAYIEAHYYEQLTLSHLADVLHLSPYHLQRT
FKRLTGLTPAAYIQQIRIREAMKLLASTHLPVTDIAGQVGYTNAAHFTTRFQNVTGLTPT
QYRGAKQQP
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatacggaaacgaccaacatccctgaggacaaatggcttgccgttctatcgaat
gacggctcttacgatgggcaatggtattacggagtgaccacgacgggaatcttttgccgg
ccgtcctgcaaatcgaagcctccgaaccgttcgcatgtccggatttttcagacatcgagg
gatgccttatccgagcgattccgcccctgcaagcgatgcaagccggtccagcagcagctg
cctgacgaggaatgggaagtacaggcccgcgcttatatcgaggcacactactatgagcag
cttaccttatcccatctcgcagacgtgctgcatctaagcccttatcatctgcagcggact
ttcaaaagacttacgggtttaacgcccgcagcctatattcagcaaatccgtatccgggaa
gcgatgaagctccttgcctcaacccatctccccgtgaccgatattgcggggcaggtaggc
tatacgaacgccgcccattttacgacaagatttcagaacgttaccggcttaaccccaacc
caataccgaggagcgaaacaacagccatga
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