Paenibacillus sp. JDR-2: Pjdr2_5450
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Entry
Pjdr2_5450 CDS
T00977
Name
(GenBank) glycoside hydrolase family 2 sugar binding
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd00052
Galactose metabolism
pjd00511
Other glycan degradation
pjd00600
Sphingolipid metabolism
pjd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Pjdr2_5450
09103 Lipid metabolism
00600 Sphingolipid metabolism
Pjdr2_5450
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Pjdr2_5450
Enzymes [BR:
pjd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Pjdr2_5450
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro2_C5
Glyco_hydro_2_C
Glyco_hydro_2
DUF4982
Glyco_hydro_2_N
Glyco_hydro_2_N2
Invasin_D3
BetaGal_ABD2
DUF7490
Motif
Other DBs
NCBI-ProteinID:
ACT04060
LinkDB
All DBs
Position
complement(6245725..6248133)
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AA seq
802 aa
AA seq
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MNKVRIINNINLNWKFHRGDEPRAWYKGLDDSDWRQVTLPHDWSVEEPFSEEHSSGTGYL
PGGIGWYRKAVTLPSNLQGKRVYITFEGVYNNSQVWCNSYYIGKRPYGYSSFTYDITDFV
SFGDQETIISVKVDHKDIADSRWFTGSGIYRDVYVTVTDQVHIDTYGVFVTTPVVSQEQA
EVAVNVKVANGSAKEELVEIKNTLLDQAGQVVQTVHSSMSVPGDSSKETEQTLIVANPKL
WSPDSPYLYTVRTEILRDGELVDHVETPAGIRWFEFDAANGFFLNGVNMKMKGVCVHHDA
GALGAAVPAKVWVRRLETLKELGCNAIRMSHNPPASNLLDLCDQMGFLVIDEAFDEWEGV
KNKWSTGHNVYPPKHFGYYEDFPQWGEIDLKEMVLRDRNHPSIIMWSIGNEVDYPNDPYC
HPYFETMTGNNDANKPAAERQYDPNKPNAERLAVIARKLAKAVKECDATRPVTAALAFPE
LSNLTGYAEALDIVGYNYKEHLYEEDLRKFPDRVTYGSENGSSLQAWLAVRDNDAISGQF
IWTGIDYLGEAKGWPVRVAGAGFMDTAGFKKTSYYYRQSLWSDKPVVFLAAIKAEDSEKG
SRRWTGGVPHWNWEAGDQLKVSCHTNCEEVELLLNGRSLGVKKLADAPELYLTWETAYAE
GTLEAVAKGKDGESYSCVLNTVTEAASLQLHADTAGLQADGLDLAHIEIQITDGEGRPVY
LAEHPIALTIEGPGEIIGMENGDIQDLEPFSSRVRKAHRGKLLAYVRATTEAGDIVVTAA
AEGLQASKVTIKAIDVTEAVNA
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggtacgtatcattaacaatattaatttgaattggaaatttcacagaggcgat
gagcctcgtgcctggtataaaggtttagacgattccgattggcgtcaggttactcttcct
cacgactggtcggtggaagagccgttctcggaggagcattccagcggaacaggctatctg
ccgggcgggatcggctggtacagaaaagcggtaactctcccttcgaatcttcaaggcaag
cgcgtttacatcacttttgaaggcgtttacaacaattcgcaagtatggtgcaacagttat
tatatcggaaaacggccgtacggttatagctcttttacttatgatataacggatttcgtc
tcgtttggagatcaggaaacgatcatttcggtaaaggttgaccataaggatatcgcggat
tccagatggtttaccggatcgggcatttacagggatgtatacgtgacggttaccgatcag
gttcatatcgatacgtacggcgtgtttgtgacaacgcccgtcgtatcgcaagagcaggcc
gaggtagcggttaatgtgaaagtggcgaacggttcagccaaggaagagctggtagaaata
aagaacactcttctggatcaagcggggcaagtggtgcagacggtgcatagcagcatgtcc
gtgccgggcgactcctcgaaagaaacggagcaaacgctgattgttgcaaatccaaagctt
tggtcgccggacagtccttatctttatacggtaagaacggagatcctgcgggatggcgag
cttgttgatcatgtcgagacgccggccggtatccgctggttcgaattcgatgcggcgaac
ggcttcttccttaatggcgtgaatatgaaaatgaaaggcgtatgcgtgcatcacgacgca
ggcgctctaggcgctgccgttccggccaaagtctgggtccggaggcttgaaacgctgaag
gaattgggctgcaacgcgatccggatgagccataatccgccggcctccaatctgctggat
ctatgcgatcaaatgggcttcctcgttattgacgaggcgtttgacgaatgggaaggcgtg
aagaacaaatggtcgacgggtcataacgtgtatccgccgaagcatttcggctattacgag
gatttcccgcaatggggagagatcgacttgaaggaaatggtgcttcgcgaccgcaaccat
ccgtcgatcattatgtggagtatcggcaatgaagtggactatccgaatgacccgtattgc
catccttatttcgaaacgatgaccggtaacaacgatgccaacaaaccggcggcggagcgt
caatacgatccgaataagcccaatgcggagcgtcttgcggttatcgccagaaagcttgcg
aaagcggtcaaggaatgcgatgcgacaaggccggtaacggctgcgcttgctttcccggag
ctgtccaacctgaccggttacgcggaagcgctcgacattgtcggctacaactacaaggag
catctgtacgaggaggatctccggaaattcccggaccgggtaacctacggcagcgaaaac
ggctcaagcctgcaggcttggctggcggttcgggataacgatgcgatcagcgggcagttc
atctggaccggcatcgattatttgggcgaggccaaaggctggccggtgcgcgtagccgga
gccggattcatggacacggcgggcttcaagaaaacaagctattattaccgccaaagctta
tggagcgacaagccggttgttttccttgccgcaatcaaggcggaggattccgagaagggc
tcgagaagatggaccggcggcgtaccgcattggaattgggaagcgggagaccagctaaaa
gtgagctgccatacgaactgcgaagaggtggagctgctcctgaacggccggtcgcttggc
gtgaagaagctggcggatgcgccggagctgtacctgacttgggagacggcttatgcagaa
ggaaccttggaagcggtggcgaaaggaaaagatggcgagtcgtattcctgcgtcctaaac
acggtaaccgaggctgcttcgctgcagctgcatgcggacactgccgggcttcaggccgac
ggactggatcttgcgcatatcgagattcagattacggatggcgagggtcgtcccgtatat
ctagccgagcatccgattgctctgacgatagaaggtccgggtgaaattatcgggatggaa
aatggcgatattcaggatctggagccgttcagctcgcgggttcgcaaagcccatcgcggc
aagcttctcgcttatgtaagagcaacaaccgaagccggggacattgttgtcacggcagcg
gcggagggactccaagcctccaaggtaacgatcaaggcaatcgacgtcacggaagccgta
aacgcgtaa
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