Paenibacillus sp. JDR-2: Pjdr2_5534
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Entry
Pjdr2_5534 CDS
T00977
Name
(GenBank) S-layer domain protein
KO
K20276
large repetitive protein
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pjdr2_5534
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLH
Cadherin-like
CarboxypepD_reg
CarbopepD_reg_2
NOMO1-like_9th
Sialidase-like_CBM
SpaA
Glucodextran_B
MetallophosN
DUF4249
Motif
Other DBs
NCBI-ProteinID:
ACT04143
LinkDB
All DBs
Position
complement(6335011..6340059)
Genome browser
AA seq
1682 aa
AA seq
DB search
MSTAMLKQHSIRNISFTMVLVIVLSIFSAIVPPSVFASAGAAGTTYYVDSAGGDDGNDGL
SEEAAWKSLTKVSVATFQPGDRILLKAGSEWTGEQLHPLGSGVEGSPITIDSYGGAGSKP
KLNGAGVIDSVVEFYNQQYWDIHNLEITNTAAGAPQDPSKLADLRGMHVTGQDAGVLKHF
YISGVNIHDVTGWNMWISGSTADDEPGSGIIHGAGWDGSKRTGGILFEILKPGANPVPTK
FDDVVIENSVFQDNSFGGIIFKQYEGDVHWASRDDGKNHSSPTDPLGQWYDPEWYPHTNI
TIRGNYFSQYDSNFACDTIYLTSVKDALVEHNVSAGAGTSAIEMYYTDNITVQYNEVYDT
LAKAGGADSNAIDPDKESTNILIQYNYIHNTGDGILLCGFVFGTATVRYNIIQDAAPAKR
FLNPHGDKGMQLVYNNIFYNTQAGSNVTFVNSSGGSAYLNDSDYAVKMFNNIFYNAAGGP
IKPVTIASGTGVTYDRNLYFGQNVTPAANEAHAIAGDPKFAGPVPTTRGDASTGPILDFT
GFKLLPGSLAIGNALDEIGMNLSNSTMNITDNGGKDFAGQPLYNGKPDIGAFEYYGDANS
GTESVTGQVKDAAGTLIDGAEVNLTVNGTKYSALTNAYGFYSIADVPIGKDYTVTATKEF
YTTGTIEHVNVTAGDTTSGVNLSVVSTNPTGTIEGTVKDTSDVTNPPAVEGAEVRVSNGS
TVYETVTTDAAGHFSLDDLPAKSGYTVTVSKPGYQSWTVTAKAGAALEVKPGITLTLADV
YLSPGKPTVVFDDSFDSSATGSVPAGWTVTATVAGGSVAVAETPSATNKSVLISQPIAGK
NGNKTSLYKALDNLSGIVTVEYSLSKSNTNQYFTVPMVYGDNSSHMAAAVGMDGTGILYK
DNGSSGTAHVVQPYTANTWYDFKLVMNTITKKFDMYIDGVKKVDQGNFRFADSTTDYLTG
IDFNSNYNVTGTVNVDNVRVSMGISYPKNDANLSGLTASAGALTKVDQTSYTMDVPNSVS
QLTLTPTAESEFAREITVNGNKVASGEASPSLSLVDGENAITVVVTAEDGVTTATYQVTV
NRTPAAVDNTLQSLTVSEGTLAPAFSPEVTEYTVSVPFSVSELSVTPTSSAASATLKLNN
FSTPNGQPSANVPLQVGENTITVNVASADGTNFLDYTLVVTREPGPAPQLTAVSVTGTIP
TLTAGGAGYDLSQLTLTGTDQYDNPYSLKDLTVTWAVASGEAYATVSGSALTPVSSGTGT
VTATVNGITGSPVAFTVEAANNGGGDNGNGNGNGNGNNGNGSTGNNNGNGSGNTNQGTVE
LSANSQGTATLSESDFAAALNAAAADASGHKTVTVKVTNGTNLVIPVSLLQAKDRTFDIQ
LQTGNGTVLIPSSMLNTSNLQAGTVELRLTKESSPDGHPVVDLSLVRDGNVIPWSNPDAP
VTVSIPYTPTADELKAPEHIVVFYIDAEGNRIPVPNGHYDAKTGQVIFTTKHFSKYAVQF
NQVSFNDLSGVAWASEAIDALAAKGVIQGKAEGVFDPRSSITRAEFITLLMRALELPQAA
AAAGFGDVSESAYYYNALASAKAYGIVTGTGDNRFEPNKQITREDTFVMTARALDALHQL
DASSNGDLSSFKDADAISSYAQASISALSAAGIVQGDATGIHPKSNLTRAEAAVMIYRVL
NN
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
ttgagtacagccatgttgaagcagcacagcatcagaaatatctcttttacaatggtactg
gttattgtcctgagcatattcagtgcgatagtaccgccatctgtatttgcctctgccgga
gcggcagggacaacgtattacgtcgattccgcgggaggggatgacggtaatgacggatta
agcgaggaagcggcgtggaagtcgctgacgaaggttagcgttgcaacgttccagccgggt
gaccgcattttgctcaaagcgggcagcgagtggacgggagagcagctgcatccgctgggc
tccggggtggaaggaagcccgatcaccattgatagttacggtggagcaggttcaaaacca
aagctgaacggcgcgggcgttatcgattccgtcgtcgaattttataatcagcaatattgg
gatattcataatcttgaaattacgaacaccgcggcgggcgctccgcaggatccttccaag
ctggcggatctgcgggggatgcatgtaaccggccaggatgccggggtgctgaagcatttc
tatatcagcggcgtgaacattcatgacgtgaccggctggaatatgtggatcagcggcagc
acggccgatgatgaaccgggaagcgggatcattcacggtgcgggctgggacggctcgaag
cggacaggcggaattttgttcgaaattttgaagccgggcgcgaaccctgtaccaacgaag
tttgatgacgttgtgatcgaaaacagcgtgttccaggataactcgtttggcggcattatt
ttcaagcaatacgaaggggatgtgcattgggcctcccgcgatgacggcaagaatcactct
tcgcctaccgacccgcttggccaatggtacgatccggaatggtatccgcacacgaacatt
acgatccgcggcaattatttcagccaatacgattcgaatttcgcctgcgacaccatttac
ttaacaagcgtaaaagatgctttggtcgagcataacgtatctgccggcgcaggcacgagc
gcgatcgagatgtactacaccgacaatattacggttcagtacaatgaagtgtacgacacg
ctggccaaagccggcggcgctgattcgaatgccatcgaccccgataaggaatcgacgaac
attctgattcaatacaactacattcacaataccggtgacggcattctgctctgcggtttt
gtatttggtaccgcaacggtccgttacaatatcattcaggacgcggccccggccaagcga
ttcctgaatccgcacggtgacaaggggatgcagcttgtttacaacaacattttctataat
acgcaggcgggctccaatgttacgttcgtcaattcatcggggggcagcgcgtacctgaat
gattcggactacgccgtgaagatgttcaacaacattttctataatgcggcgggaggaccg
atcaaaccggttaccatcgcttcgggtacgggcgtaacttacgatcgcaatctgtatttc
gggcaaaatgtaacgcctgcagccaatgaagcccatgcgatcgcaggcgatccgaagttt
gccggtccggttccaaccacacgcggcgatgcttcgacaggtcccattcttgattttacg
ggctttaagctgctgccaggatctcttgcgatcggcaatgctctggatgagatcggcatg
aacctaagcaactcgaccatgaacattacggataacggcggcaaggattttgccggacag
cctttgtacaacggcaagccggatatcggcgcgtttgagtattacggcgatgcgaacagc
gggacggagtccgttaccggacaggtcaaagacgctgcgggcacgctgattgacggggcg
gaagtcaacctgacggttaacggcacgaaatattcggcgctgaccaatgcgtatggcttc
tacagcatagctgacgtacccattggaaaagactacacggttacagcgacaaaggaattc
tatacaacgggcacgattgagcatgttaatgtgacagccggagataccacttcgggcgta
aatctgtcggttgtttcaacgaatccgacggggaccattgaaggtacagtcaaagacacc
tcggatgtaaccaatccgccagccgtggaaggagccgaggtacgcgtcagcaacggatct
acggtatacgagacggttacaacggatgcagcgggccatttctcgctggacgatctgccc
gcgaaatccggttataccgtgacggtatcgaagcccggttatcaatcctggacggtaacg
gcaaaagccggtgcggcgctcgaagtgaaacccggtattaccttaacgcttgcggatgtt
tacttgtcgccgggtaaaccaacggttgtttttgacgacagctttgattccagcgcaaca
ggatccgtgccggcaggctggacggttacggcaacggttgcgggcggcagcgtcgcggta
gccgagacacctagcgcgaccaataagagcgtactgatctcccagccgattgccgggaag
aacggcaataagacttcgctttataaagcactggataacctgagcggtatcgttacggtc
gagtattcgctcagcaagagcaatacgaatcaatattttacggtgccaatggtttatggc
gataattcctcgcatatggcggcagccgtcgggatggatggcacgggcatcctgtacaag
gataacggctcgtccggtacggcccatgtcgtgcagccttacacggctaacacctggtat
gacttcaagctggttatgaacacgattacgaagaaattcgatatgtacattgacggagtt
aaaaaggtggatcaaggcaatttccgattcgcggactccacgacggattatttaacgggt
atagattttaactctaattacaatgtaacgggtaccgtaaacgtggataacgtaagggtc
agcatggggatttcctacccgaaaaacgatgcgaacctatccggtctgacggcaagcgcc
ggagcattaacgaaggttgaccagacgagttatacgatggacgtgccgaacagcgtaagc
caactgacgttgacgcctacggccgaaagcgaatttgcgagagaaattacggtaaacggc
aataaggtggcaagcggcgaggcttcgccaagtctgtctctggttgacggagaaaatgcc
attacggttgttgttaccgcggaagacggcgtaacgacggcgacctaccaagtgacggtg
aatcgtacgccagccgctgttgataacactttgcaaagcttgacggtaagcgaaggaacg
cttgctccggcgttctcgccggaagtaaccgaatatacggtaagcgtgccgtttagcgta
agcgagctttccgttacgccaacgtcaagcgcggctagcgccacgctgaagctgaataac
tttagcacgcctaatggccagccttcggcaaacgtaccgcttcaagtcggcgagaataca
atcacggttaacgttgcttccgctgacggaaccaacttcctggattatacgcttgtcgta
acgagggaaccggggccagcgcctcaattaaccgctgtttcggtaacgggaacgattcct
acgttaaccgccggcggcgcgggttacgatctcagccagctgacgttgacgggaaccgat
caatacgataatccttacagcctgaaagatctgacggttacttgggcggtagcatccggc
gaagcttatgccaccgtatccggcagcgcgctgacaccggtaagttccgggacaggcacc
gtaaccgcaacagtgaacgggataaccggcagtccggttgccttcacggttgaagcagcc
aataacggcggcggggacaatggaaacggcaacggcaacggaaatggaaacaacggcaat
ggcagtacgggcaataacaacggcaacggaagcggtaatacgaatcaagggacagttgag
ttgtctgccaacagccaaggaacggcaacgctgtcggaatccgatttcgcggcggccttg
aatgcagcggcagcggatgcttccggacacaagaccgttacggtaaaagtgactaacgga
accaatcttgttatcccggtttccctgctgcaagcgaaggatcgtaccttcgatatccag
cttcaaaccggtaatggcacggtactaattccatcatctatgcttaatacctccaatctt
caggcaggtacagttgagcttcgcctgactaaggagagcagcccggatggtcatccggtt
gtagatttgtctcttgttcgcgacgggaacgttattccgtggagcaacccggatgcgccg
gtaacggtaagcattccgtatacgccaaccgcggatgaactgaaagcaccggagcatatc
gttgtcttctacatcgatgcggaaggcaatcgcattccggtaccaaacggccattacgat
gcgaagacaggtcaggttatctttacaaccaagcatttcagcaagtatgcggtacagttt
aaccaggtctcgtttaacgatttgtccggcgtagcctgggccagcgaagcaattgacgct
cttgcagccaaaggggttatccaaggcaaagcggagggtgtattcgatccgcggagtagc
attacccgcgcggaatttatcacgcttctgatgcgcgccttggagcttcctcaagcagcg
gcagcggcggggttcggcgatgttagcgagtctgcatactactacaatgcacttgcgagc
gccaaagcctacgggatcgtaaccggaacgggagacaaccgtttcgagcctaacaagcag
atcacccgcgaggatacgtttgtgatgacggcaagagccctcgatgctcttcatcagctt
gatgcttcctcaaacggcgatctgtcttcattcaaagacgcggacgctatttcaagctac
gcgcaggccagcatctccgctctatcggcggcaggtattgtccaaggcgacgcaacgggc
atccacccgaaatccaatctgacccgcgcagaagcggcggtaatgatctacagggttttg
aacaactaa
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