Paenibacillus sp. JDR-2: Pjdr2_5567
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Entry
Pjdr2_5567 CDS
T00977
Name
(GenBank) transcriptional regulator, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
pjd
Paenibacillus sp. JDR-2
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pjd03000
]
Pjdr2_5567
Transcription factors [BR:
pjd03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Pjdr2_5567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_AraC
HTH_24
HTH_Tnp_ISL3
HTH_23
Sigma54_DBD
HTH_Crp_2
HTH_3
Glyco_hydro_114
HTH_10
Crp
HTH_AsnC-type
Sigma70_r4
Phage_terminase
MarR
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ACT04175
LinkDB
All DBs
Position
complement(6372339..6373388)
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AA seq
349 aa
AA seq
DB search
MMAKLKDIAEQVGVSISTVSRVMKNDSTRSVSEETRKKIWEVAEKLGYKANRAEKLGKSD
NKLMVHIGCVVAIPQNKYNNPYFSVILEGIEKALTESGLRLDFVYSIENQQDIQQLQSLV
KEHRIDGMIIVERIDADAYQWIKQNVKAVVGVDLADRTIPVVCYDREAAAKEAVQHLIKQ
GHKQIGYIGGPELNDPFRQEKRFLGYQSAMREAGLELNDNWIIDVKWDVSLSYELTKQAF
EKKGYSPTAIFAASDMMAIAAMRAASERGLRIPEDIAVAGVDNIEISEFTSPPLTTIHVP
KIEMGMYAVKLLLDYLNHQYSLPVRMTIPYRMIYRRSSESQQPAISSVQ
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgatggccaagttgaaggatattgcagagcaggtcggggtatcgatctcgacggtatcg
cgggtcatgaagaatgactccacccgttccgtcagcgaagagacccgtaagaaaatttgg
gaagttgcggagaagctcggctacaaggcgaaccgtgcggagaagctgggcaaatccgat
aacaagctgatggttcatatcggctgtgtcgttgccattcctcagaacaaatataataat
ccttacttctccgttattttggagggtatcgagaaagcattgacagagtccggtctacgg
ctggattttgtatacagcatcgagaatcagcaggatatccagcagctgcagtccctcgtg
aaggagcaccggattgacgggatgattattgtcgagcggattgacgcggatgcgtaccaa
tggatcaagcagaatgtgaaggctgttgttggcgtggatttggcggacagaacgattccg
gtcgtctgctatgaccgcgaagccgcggcgaaggaagccgtgcagcatctcatcaagcag
ggacataagcagattggctatattggcggtccggagctgaacgatcctttccgccaggag
aaacggttcctcggctatcaaagcgcgatgcgcgaagcggggctcgagctgaacgacaat
tggattatcgacgtgaaatgggatgtatccctaagctacgaactgaccaagcaggcattc
gagaaaaaaggctattcgccaaccgccatattcgcggccagcgatatgatggcgattgcg
gcgatgcgcgccgcttcggagcgcggtcttcgcattccggaggatattgcggttgctggc
gtcgataatatcgaaatctccgagtttacttcgccgccgcttacgaccattcatgtacct
aaaatcgagatgggaatgtacgcggtgaagctgctgctcgattatttgaatcatcaatat
tcgctgccggtgcgcatgacgattccgtaccggatgatataccgccgctcttccgagtcc
cagcaaccggccattagcagcgtgcaataa
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