Paenibacillus sp. JDR-2: Pjdr2_5576
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Entry
Pjdr2_5576 CDS
T00977
Name
(GenBank) glycoside hydrolase family 38
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Pjdr2_5576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pjd04131
]
Pjdr2_5576
Enzymes [BR:
pjd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
Pjdr2_5576
Membrane trafficking [BR:
pjd04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
Pjdr2_5576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Laman-like_dom
DUF6473
Motif
Other DBs
NCBI-ProteinID:
ACT04184
LinkDB
All DBs
Position
complement(6393242..6396001)
Genome browser
AA seq
919 aa
AA seq
DB search
MANADHRKTAHIISHTHWDREWYLPYEKHHVRLIALMDTLMDTLENDTEYRSFYLDGQTI
IIEDYLQVRPDQRERLEKWIREGRIHIGPWYVLQDAFLTSSEANVRNLQIGHQDAAQYGT
IAKVGYFPDTFGNIGQAPQLMKQAGIDNAVFGRGVKPTGFNNMVSDSAYESSFSELVWEG
PDGSQVLGILFANWYSNGNEVPVDEAEAKEYWDRKLADAGKYASTGQLLFMNGCDHQPIQ
TDLAEAIRVARKLYPDTDFVHSNFPDYLASLKSSLENKQLSVVRGELRSQRTDGWSTLVN
TASARVYLKQMNQVGQTILEKVAEPLASFAHMTGKAKYPHHLLKYAWKTLMQNHPHDSIC
GCSVDEVHREMVTRFDKSRHVAETIVDDSKHAVAGAVDTSAFAGCGQDALPLVAFNTTGW
TRSGVVEIELDVARVYYREGIAPNDMMRMMKEISLEGRTLVDADGNAVEHTFEDLGLQFG
YDLPDDKFRQPYWTRRVKLTFEATAVPALGLKTYAWVLGAASDAPSQSLVTGDRTLANEN
LSIEIAEDGTLAVTDIASGRTYRDLLIYEDAGDIGNEYMFKQPDGEPALTTKGLKAEIRV
IEDNAYRASFEIVHHWSIPASADELFEQEKQEAVYYPERKAGRSTDYVPFTIRTVVSLER
SGRGVGIRTTFNNQAKDHRVRALFPTDLAASVHRADAIFEVAVRDNDPAAEWENPSNAQH
QQAFADVSDGTQGLTIANLGLNEYEVLRDGRNTIAVTLLRSVSELGDWGVFPTPEAQCLG
EQTVELLILPHGGDGAATGAYASAYQFQAPWTIAQTGVHGGTLSPVHTFLAWEGEGIAFS
SVKIAEATGDLMLRWFNMRPEAANLQAQPNVGSAAAAYASDVLEQAGERLQPSGEDANGS
FAAELGPCEIYTVGIKAEQ
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgctgatcatagaaaaacggcgcatatcatctcgcacacgcattgggaccgc
gaatggtatctgccttacgagaaacaccacgtgcggcttatcgcgcttatggatacgctg
atggacacgctggagaacgacacggaataccgcagcttttatcttgacggacagacgatc
attatcgaagactacctgcaagttcgcccggaccaaagggagcgcctggagaaatggatc
cgcgagggccgcattcatatcggtccatggtacgtgctgcaggatgcgttcctgacaagc
agcgaagcgaacgtccgcaatctgcagatcgggcatcaggatgccgcgcagtacggcacg
atcgcgaaggtcgggtatttccccgataccttcggcaacatcggccaagcgccgcagctc
atgaagcaggcgggtatcgacaacgcggtattcggccgcggcgtcaagccgactggcttc
aataacatggtttcagactccgcgtacgagtcttccttctcggagctcgtatgggaaggg
ccggacggctcgcaggtgctcggcattttgtttgccaactggtacagcaacggcaacgag
gttcccgtggatgaagcggaagccaaggaatactgggaccgcaaactggccgatgcgggc
aaatacgcatcgacggggcagctgctcttcatgaacggctgcgatcatcagccgatccag
acggatctggccgaagccattcgcgttgctcgcaagctatacccggatacggatttcgtt
cattcgaatttcccggattatctggcgtcgctgaagtcgtcgctcgaaaacaagcaactg
tcggttgtgcgcggcgagctgcgcagccagcggacggacggctggtcgacgctcgtgaat
acggcgtccgcccgcgtctacctgaaacagatgaaccaggttggccagacgatcctcgag
aaggtcgccgagccgctcgcctcgttcgcgcatatgacgggcaaggccaagtatccgcat
catctgctgaagtacgcttggaaaacgctcatgcagaaccatccgcacgacagcatctgc
ggctgcagcgtcgacgaggtgcaccgcgaaatggtcacccggttcgataagagccgccat
gtggcggagacgatcgtcgacgatagcaagcatgcggttgccggcgccgtcgatacgagc
gcgttcgcgggctgcggccaggatgcgctgccgcttgtcgcgtttaatacgacgggatgg
acgcgaagcggcgtcgtggaaatcgagctggacgttgcgcgcgtgtattaccgcgaaggc
attgccccgaatgacatgatgcgcatgatgaaggaaatttctctcgagggccgcacgctt
gtggatgcggacggcaatgccgtcgagcatacattcgaggatctaggcttgcagttcggc
tacgacctgccggatgacaaattccgtcagccgtattggacgcgccgcgtgaagctgacg
ttcgaagcgaccgccgtgccggcgcttggcttgaaaacttacgcttgggtgctcggagcc
gcaagcgacgctccgtcgcagtcgctcgtgaccggtgaccgtacgcttgcgaacgaaaac
ctgagcatcgagatcgccgaggacggaaccttggcggtaacggatatcgccagcggacgc
acgtaccgcgatctgctcatctatgaagatgccggagatatcggcaacgagtacatgttc
aagcagccggacggcgagccggcgctcacgactaagggtcttaaagccgaaatccgcgtc
atcgaagacaacgcgtaccgcgcatcgttcgagatcgtgcatcattggtcgatcccggca
tccgccgacgagctgttcgagcaggagaagcaggaagccgtttattatcccgagcgcaaa
gccggccgttcgacggactacgtgccgttcacgatccgaaccgttgtcagcctggagcgc
tccgggcgcggcgtaggcatccgtacgacgtttaataaccaagcgaaggaccatcgcgta
cgcgccttgttcccgacagacttggccgcgtccgtccaccgggccgacgcgatcttcgaa
gtggcggttcgggacaacgacccggccgccgaatgggagaacccaagcaacgcgcagcat
cagcaagcttttgccgatgtcagcgacggcacgcagggcctcaccatcgcgaaccttggc
ttaaacgaatacgaagtgctgcgcgacggccgcaatacgattgccgttacgctgcttcgc
tccgtctccgaactgggcgactggggcgtcttcccgacgccggaagcgcaatgcctcggc
gagcaaacggtcgagcttttgatccttccgcatggcggcgacggcgcggcaacgggcgcg
tatgcgtccgcgtatcagttccaagcgccgtggaccatcgcgcaaaccggcgtgcacggc
ggaacgctttcgccggtgcacacgttcctggcatgggaaggcgaaggcatcgcgttctcc
tcggttaagattgcggaagcaacgggcgacctcatgctgcgctggttcaacatgcggccg
gaagcagcgaatctgcaggcgcagccgaacgtcggctctgccgcggcggcttacgcgagc
gatgtgcttgagcaggcgggcgaacgcctgcagccgtccggcgaagacgcgaacggctcg
ttcgcggcggaactcggaccgtgcgagatctatacggtaggcatcaaggcagagcaataa
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