Paenibacillus sp. JDR-2: Pjdr2_5713
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Entry
Pjdr2_5713 CDS
T00977
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pjd
Paenibacillus sp. JDR-2
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pjd03400
]
Pjdr2_5713
DNA repair and recombination proteins [BR:
pjd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Pjdr2_5713
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
AAA_16
DnaB_C
AAA_22
Lon_C
NTPase_1
nSTAND3
AAA_24
KdpD
RecA
AAA_14
NACHT
AAA_5
Fer4_NifH
ATPase_2
DAP3
AAA
NPHP3_N
AAA_30
HypA
CbiA
SLFN-g3_helicase
AAA_31
ADH_zinc_N
MeaB
DUF2642
KTI12
zinc_ribbon_6
ArsA_ATPase
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
ACT04319
LinkDB
All DBs
Position
complement(6533918..6535285)
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AA seq
455 aa
AA seq
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MAKIKLKFVCTECGTESPKWLGKCPGCQSWNTMVEEKETVVKTQGVGLRVAQTKEKPQSI
IHIESGQEPRIETRLQELNRVLGGGVVPGSLILVGGDPGIGKSTLLLQTSHALASKGLKV
LYISGEESVRQTRLRADRLGALTESLFVLCETNMEQINDAIESVQPDFLVIDSIQTVYDP
NVQSAPGSVAQVRECTAHFMRVAKIKGIATVLVGHVTKEGAIAGPRLLEHMVDCVLYFEG
ERHHTYRLLRAVKNRFGSTNEIGIFEMGEEGLREVANPSELFLSERPLGVSGSTVVASME
GTRPVLVELQALVAATNFPSPRRMSTGIDHHRMALIIAVLEKRIGMFLQTQDAYLNVAGG
VKLDEPAVDLAAAVSLASSFRDAPTRPYDVIFGEVGLTGEVRAVSRAEQRVKEAEKLGFK
RVIMPEKSLKGWKPPEGIEIIGVSTVAEALSAALG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagataaagctaaagtttgtatgtactgaatgcgggacggaatcgccgaaatgg
ctggggaaatgtccgggctgccagtcttggaatacgatggtggaggaaaaagagaccgtt
gtcaaaacacaaggtgtcggtcttcgcgtggctcagacgaaagaaaagccgcaatccatc
atacatatagaaagtgggcaggaaccgcgtattgaaacacggttgcaggagcttaaccgg
gtgctgggcggaggcgttgtgccaggctcgctaattctggtaggcggagatcccggaatc
ggaaaatccacgctgctgttgcaaacctcgcatgcgttggcctcaaaggggctgaaggtg
ctctatatttccggggaggaatccgtccggcagacgcgtctccgcgctgaccggcttggt
gctctgacggaatccctttttgtcctttgcgagacaaacatggagcaaattaacgatgcg
attgaatcggtccagccggattttctcgtcatcgactccattcagacggtgtatgatcca
aacgttcagtctgctccgggcagcgtcgcccaggtaagggaatgtaccgctcacttcatg
cgggtagcaaaaatcaaaggaatcgctaccgtgcttgtcgggcatgtgacgaaagaaggc
gcaattgccggtccccgtctgctggagcatatggtcgactgcgtgctgtacttcgaaggc
gagcggcatcatacttaccggctgctccgggccgttaagaaccggtttggctccactaat
gagatcggcatattcgaaatgggtgaagaaggccttcgagaagtggccaatccgtcagag
ctgttcctgtcggagcgcccgcttggcgtatccggctctacggttgtagccagtatggaa
ggaacccgacccgtgctggttgagcttcaggcgcttgtcgcagcaacgaatttcccgtcg
ccgcggcggatgtccacaggaatcgatcatcaccggatggcattaattattgcggtatta
gagaagcggatcggtatgtttttgcagacgcaggatgcctatttaaatgtggcgggcggc
gtgaagctggatgagccggcagttgaccttgcggctgcagtctcgctggcgtcaagcttt
cgcgatgcacctacgcgcccctatgacgttatcttcggcgaagtgggcctgacaggcgag
gttcgtgcggtatcccgtgccgagcagcgggtgaaggaagcggagaagcttggcttcaag
cgggtcattatgccggagaaaagcttaaagggctggaagccgccggaaggcatcgagatt
atcggcgtgagtacggtagcagaagcgctgtccgcggcacttggatag
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