Prevotella jejuni: CRM71_02390
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Entry
CRM71_02390 CDS
T05287
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pje
Prevotella jejuni
Pathway
pje03030
DNA replication
pje03430
Mismatch repair
pje03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pje00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CRM71_02390
03430 Mismatch repair
CRM71_02390
03440 Homologous recombination
CRM71_02390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pje03032
]
CRM71_02390
03400 DNA repair and recombination proteins [BR:
pje03400
]
CRM71_02390
Enzymes [BR:
pje01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CRM71_02390
DNA replication proteins [BR:
pje03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CRM71_02390
DNA repair and recombination proteins [BR:
pje03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CRM71_02390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
T2SSK
DUF6282
Motif
Other DBs
NCBI-ProteinID:
AUI54297
UniProt:
A0A2K9H9A7
LinkDB
All DBs
Position
I:complement(601713..605432)
Genome browser
AA seq
1239 aa
AA seq
DB search
MEDFVHLHVHTNYSILDGQSKVTRLVDKAIADGMRGMAITDHGVMFGIKEFADYCAKVNK
GRKEKGEEPFKPIFGCEMYVARRTMHDKDKSMHDNSGYHLIVLAKNYTGYKNLIKLVSNA
WVDGYYYRPRTDREQLEKYHEGLIVCTACIAGEVPNKIIHDDIEGAREACEWYHRVFGDD
YYLELQRHEVKDPTLMANREAYPLQQKANKVLMKFAQEYGIKLICTNDCHFEDKETAEAH
DHLLCLSTNEDLDDPKRMRYSKQEWFKTKAEMNEVFSDVPEAMANTLEILDKVETYSINH
GPIMPFFPIPEDFGTEEEWREKFTEEDLYKEFTTDENGENPLTKEEGQKVIDRLGGYEKI
YRIKFEADYLAKLAYDGAKKLYGDPLSDEVKNHIRFELHVMKTMGFPGYFLIVQDFINAA
RQELDVMVGPGRGSAAGSVVAYCLGITQIDPLKYDLLFERFLNPDRVNLPDIDTDFDDDG
RGRVLQWVMDKYGHENCAHIITYSTMATKNSIKDVARVEKLPLDVSNALCKAIPERLPDG
MKMNLTNAIKCTPELQNAEVSEDVRERNTIKYAKMLEGTVRGTGIHACGFIICRNPIDEW
VPISTATDPDFPEKKVPVTQYDGHVIESTGLIKMDFLGLKTLSELKEACKVVKQTTGDVI
DLEKIPIDDELTYQLYQRGQTVGTFQFESAGMQKYLRELHPTVFEDLIAMNALYRPGPMD
YIPDFIKRKHDPSLVKYDIPCMEKYLKDTYGITVYQEQVMLLSRQLANFTRGESDALRKA
MGKKMKAIVDKMKPKFIKQGQENGHDPQILEKIWSDWEKFASYAFNKSHATCYSWVAYQT
AYMKAHYPAEYMAALMTRRFSQITEITKLMEECKALRIATLGPDVNESQIGFGVNKHGEI
RFGLSAIKGMGASAAESIVREREKNGPYKDIYDFAERVDFSNVNRKAFESLAYSGGFDSF
GLQREQYFAITGKGDSFLDTIVRYGQLFQAEKAQQQNSLFAGMDAIDVVHPVAPKAEKWP
VIEKLNKERELVGIYLSAHPLDEYSVVLNNMCNTHCSKIGRNADMTQLAKADEVTFGGIV
TSVNERFSQKTGKPFGFVTIEDFGGTGELALFGDDWARWNNLLKMNYTVYITAKCQPRYR
NNPELLELKVQKIEQLYDVKKNRLERLTISMDATALDEAFVKELSTVIEQHTGNTQLYIQ
LRTPDSTVLMLKSKKGGVNVDRKLIDFISSNEKMEFHIN
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggaagatttcgtacatttacacgtccacaccaactattctattcttgatggtcagtcg
aaggtcacacgtcttgttgataaggctattgctgacggaatgaggggtatggcgattact
gatcacggtgtgatgtttggcataaaagagtttgctgactattgtgctaaggtcaataaa
ggtaggaaagagaagggggaagagcctttcaaacctatctttggatgtgagatgtacgta
gcccgtcgtactatgcacgataaggataagagcatgcatgataattctggctaccacctt
atcgtattagcgaagaattatacaggttataagaaccttatcaaactggtatccaatgcg
tgggtagatggttattactatcgtcctcgtacggaccgtgagcagcttgagaagtatcat
gaagggttgattgtatgtacagcttgtattgcaggtgaggtacctaacaagattattcat
gatgatatcgagggtgcaagagaggcttgtgagtggtatcatcgtgtgtttggagatgat
tactaccttgaactacagcgtcatgaagtaaaagatccaaccttgatggctaaccgtgag
gcttatcctctacagcagaaagccaacaaggtgctcatgaagtttgcacaagaatatggt
ataaagttaatatgtaccaacgactgtcactttgaagataaggagactgccgaggctcat
gaccatctactctgcctttcaacgaacgaggatttagacgatccaaagcgtatgcgctac
tctaaacaagagtggtttaagacgaaggcggagatgaatgaggtcttctctgatgtccct
gaagctatggcgaatacgttggagattcttgacaaggtagagacgtatagtattaatcac
ggtcctatcatgccgttcttccctatcccagaggactttggaaccgaagaagagtggaga
gagaagttcactgaagaagacttatacaaggagtttaccaccgacgagaacggtgagaac
ccactaacaaaggaagaaggacagaaggttatcgaccgcttaggcggctatgagaagata
tatcgcattaagttcgaggccgactatttagctaagttagcctacgacggtgcaaagaag
ctatatggcgaccctctatcagatgaggttaagaaccatatccgatttgagttacatgtg
atgaagaccatgggtttccctggatacttccttattgtgcaagacttcatcaatgctgca
cgacaggagttagacgtgatggtgggtcctggtcgtggctctgctgcaggctccgtagtg
gcttattgcttgggaataacgcagattgacccgctgaaatacgaccttctgtttgagcgt
ttcctcaatcctgaccgtgtcaacctacctgatattgatactgactttgatgatgatggg
cgcggacgtgtgctgcagtgggtaatggataagtatggacacgagaactgtgcacatatc
attacctactctaccatggctacaaaaaactctatcaaggatgtggcacgtgtagagaaa
ctaccgttagatgtgtctaacgctctttgtaaggctattccagagcgcttacctgatggt
atgaagatgaacttaacgaatgctatcaagtgtacaccagagttgcagaatgctgaggtt
agcgaagacgtaagggagcgcaacaccattaaatatgccaagatgttggaaggaacagtg
cgtggaacaggtatccatgcctgtggcttcataatatgtcgtaatcctattgatgagtgg
gtacctatctctacggcaacagacccagacttcccagagaagaaagtaccagtaacacaa
tatgacggtcacgtgattgagtctacaggacttatcaagatggacttcctcggactgaag
actctctccgagttaaaggaggcttgcaaggttgttaagcagacgactggcgacgtgatt
gaccttgagaagattcctattgacgatgaattaacctatcaactctaccaacgtggacag
acagtcggtacgttccagtttgagtcggcaggtatgcagaagtacctccgagagcttcat
ccaaccgtgtttgaagacctcatcgccatgaatgcgctctatcgtccgggtccaatggac
tatatcccagactttatcaagcgtaaacacgacccatcactggtgaagtatgatatccca
tgtatggagaagtacctcaaagacacatacgggatcacagtctatcaggagcaagtaatg
ctcttgagtcgccagttagccaactttacacgtggtgagagtgatgcccttcgtaaggcg
atgggtaagaagatgaaggctatcgtcgacaaaatgaagcctaagttcatcaagcaagga
caggagaatgggcacgacccacagatacttgagaagatatggagtgactgggagaagttt
gccagctatgctttcaataagtcacatgccacttgttactcatgggtagcttatcagacg
gcctatatgaaggcgcattatccagccgaatacatggctgcgttgatgacacgtcgcttc
agtcagattaccgaaatcaccaagttaatggaggagtgtaaggcattgaggattgcaacc
cttggacctgatgttaacgagagtcagataggcttcggtgtaaacaagcatggtgagatt
cgcttcggactatccgccatcaagggaatgggtgcgagtgctgcagagagtatagtacgt
gaacgtgagaagaacggcccttacaaggatatatacgactttgcagaacgtgtcgacttc
agtaatgtcaaccgcaaagcatttgagagtttagcctatagtgggggcttcgatagcttc
ggattgcagcgagaacaatactttgctattactgggaaaggtgattccttcttagacacc
attgtccgttatgggcagcttttccaagcagaaaaggcccaacaacagaactctctcttc
gctggtatggatgctattgatgtagtacatcctgtcgctccaaaggctgagaagtggcca
gtcattgagaaattgaataaggaacgagagttggttggtatctatctatcggcccatccc
ctcgatgaatacagtgttgtactgaacaacatgtgtaacactcactgttctaagataggt
cgtaatgctgacatgacacaattggcaaaagctgacgaagtgacattcggcggtattgtc
acatccgttaacgaacgtttctcacaaaagacaggaaagccatttggctttgtcacgata
gaagactttggtggaacgggtgaattagcactgtttggggacgactgggcacgatggaac
aacctcttgaagatgaactataccgtttatatcacagccaagtgccaacctcgttatcgc
aacaatccagaactgttagagctgaaggtgcagaagatagagcaactctatgacgtgaaa
aagaaccgtttggaacgcctcaccatctctatggatgcgacagcattagacgaagccttt
gtcaaggaactatcaacagtcatcgagcaacatacaggtaacacacaactctacatacag
ttgcgaacgcctgacagcacagtacttatgttaaagagcaagaaaggcggtgttaacgtc
gaccgtaagctgatagactttatctcatctaatgagaagatggagttccatatcaattaa
DBGET
integrated database retrieval system
