Prevotella jejuni: CRM71_04290
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Entry
CRM71_04290 CDS
T05287
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pje
Prevotella jejuni
Pathway
pje03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pje00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CRM71_04290 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pje03019
]
CRM71_04290 (rny)
Messenger RNA biogenesis [BR:
pje03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CRM71_04290 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF4954
KH-I_KHDC4-BBP
ARA70
Motif
Other DBs
NCBI-ProteinID:
AUI54622
UniProt:
A0A2K9HJ68
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All DBs
Position
I:complement(1075313..1076854)
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AA seq
513 aa
AA seq
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MSPIVTVIIAVVCLSAGCAGGFAFFRYILTGKYKDTMDKAEKAAEVIKEKKLLEVKEKFL
NKKSELEKEVQQRTLKIQQGENRLKQREVTLNQRQEEINRRKQDVEQQQQRVDNEKKLLQ
IKQQDLEKMQEQERMKLEELSGLSSEEAKKRLIESLKDQAKLDAASYINEIVDEAKLNAN
QQAKKIVIQTIQRVATETAIENSVSVFHIDSDEVKGRIIGREGRNIRALEAATGVEIVVD
DTPEAIVISAFDPVRREICRLALHQLVADGRIHPARIEEVVAKVKKQLDNEIIETGKRTA
IDLGIHGLHPELIRIIGKMKYRSSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLL
HDIGKVPDEETDLPHALYGGKIAEKYKEKPDICNAIAAHHDEVEMTTLLAPIVQVCDAIS
GARPGARREIVEAYIKRLNDLEAIAMSYPGVTKTYAIQAGRELRVIVGADKMDDAESEKL
SSEIAEKIQNEMTYPGQVKITVIREIRSVAYAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagtccaattgtaacagttataatagctgtggtatgtctttcagcaggatgtgctgga
gggtttgctttttttcgttatatcttaactggaaagtataaggatacaatggataaagcg
gaaaaggctgcagaagttattaaagaaaagaagctgcttgaagttaaagagaaattcctt
aataagaaaagtgaacttgaaaaagaagttcagcagcgtacgctgaaaattcagcaaggt
gaaaaccgcttaaagcagcgtgaggtaacgttgaatcagcgtcaagaggaaataaatcgc
cgtaagcaagatgttgagcaacaacagcagcgcgttgataatgaaaagaagttgctacaa
attaagcaacaggatcttgagaagatgcaggagcaagagagaatgaagcttgaggaactc
tcaggacttagttcagaagaagcaaaaaagcgtttgatagagagtctgaaagatcaagct
aaacttgatgctgcttcttatattaatgaaattgttgacgaagcaaaacttaatgctaat
caacaagcaaagaagattgtcattcaaactattcagcgcgttgcaactgaaacagctata
gaaaattctgttagtgttttccatattgatagtgatgaagttaaaggacgtatcattggg
cgtgaaggtcgaaatattcgtgccttggaggcagcaacaggtgttgagatagttgttgat
gatacgcctgaagcaattgtcatttctgcatttgatcctgttcgtcgtgagatttgtcgt
ttggcacttcatcagcttgttgcagatggtcgtattcatcctgcacgtattgaggaagtt
gtagcaaaggtgaagaagcagcttgataatgaaattatagagacaggcaagcgtacagct
atcgatttaggcattcatggccttcatccagagttgattcgaattattggtaagatgaaa
tatcgttcttcatacgggcagaaccttctacagcatgctcgtgaaacagccaatctctgt
gcggttatggcaagtgagttaggcttgaatccgaagaaagctaaacgtgccggattgtta
catgatattggcaaggtacctgatgaagagacggatttaccacatgctctttatggtggt
aaaatagctgaaaagtataaagagaagccagatatctgtaatgctattgctgcgcaccat
gatgaagttgagatgacaactcttctcgctccaatcgtacaggtatgtgatgctatctcc
ggagcacgtccaggtgcacgtcgtgaaattgtagaagcatatattaagcgactaaatgat
cttgaagcaatagcaatgagttaccctggtgtaacgaagacctatgctattcaagcaggt
cgcgaacttcgagtaatcgtaggagcagataagatggatgatgcagaaagtgagaagcta
agttctgagattgcggaaaagattcagaatgagatgacttatcctggccaagttaagatt
acggtcatccgtgaaatccgttctgttgcgtatgcaaaatag
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