Prevotella jejuni: CRM71_05340
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Entry
CRM71_05340 CDS
T05287
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pje
Prevotella jejuni
Pathway
pje03410
Base excision repair
pje03430
Mismatch repair
pje03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pje00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CRM71_05340 (recJ)
03430 Mismatch repair
CRM71_05340 (recJ)
03440 Homologous recombination
CRM71_05340 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pje03400
]
CRM71_05340 (recJ)
DNA repair and recombination proteins [BR:
pje03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CRM71_05340 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CRM71_05340 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CRM71_05340 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AUI54797
UniProt:
A0A2K9HAP8
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All DBs
Position
I:1312662..1314386
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AA seq
574 aa
AA seq
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MQFKWNYIPPTETQDNAAKDLGEKLGISTILASLLIRRGITTESAAKRFFRPQLADLINP
FLMKDMDAAVDRLNDAMGHKERILVYGDYDVDGCTAVALVYKFLRQFYSNIDYYIPDRYD
EGYGVSKKGIDFAKETGVKLIIILDCGIKAIEEITYAKEQGIDFIICDHHVPDEEMPPAV
AILNPKRPDDTYPFKNLCGCGVGFKFMQAFAKNNNIPFSRLVPLLDFCAVSIAADLVPVV
DENRILAFHGLKQLNQNPSLGLKAIIDICGLNGRELSMSDIIFKIGPRINASGRMENGKK
SVDLLVEREYSLAFDQAKHIDEYNEQRKDVDRQMTEEANQIVARLESQKHQSSIVLYDEH
WKKGVIGIVASRLTEIYFRPTVVLTRDENLATGSARSVAGFDVYAAIKSCRDLLLNFGGH
TYAAGLTMKWADVKEFRKRFQAYVEQHIEPEQREAILDIDAVIDFKDITKKLHTDLKRFA
PFGPGNPKPLFCTLDVYDFGTSKVVGREQEHIKLELVDSKSNNVMNGIAFGQSASARYIK
SKRSFDIAYTIEDNVFKRGSVQLQIEDIRPTEDC
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttaaatggaactacattccacctacagagactcaggacaatgcagctaaagac
ttaggagagaagttaggtattagcactattcttgcttcactgctgatacgtcgtggtata
acgacggagagtgctgcaaaacggttcttccgtcctcagttggcagacctcatcaaccct
ttcttaatgaaggatatggatgctgctgtcgaccgtctcaatgatgcgatggggcataag
gagcgtattcttgtctacggagactatgacgtagacggctgtacagctgtagcgttggta
tataaattcttacgacaattctattcaaacatcgattactacatccccgaccgctatgat
gagggttatggagtaagcaagaagggaatagactttgctaaagaaacaggagttaaactt
attatcattctcgattgtggcatcaaagcaatcgaagagataacctatgccaaggagcag
ggaatagactttatcatctgtgaccaccatgttcctgatgaagagatgcctcctgcagta
gctatccttaacccaaaacgaccagatgacacttatcctttcaagaacctttgtggttgt
ggtgtaggttttaagttcatgcaagcatttgcaaagaacaataatattcccttttctcga
cttgttcccctactcgatttctgtgctgtcagcattgcagccgatttagttcctgtagta
gacgagaatcgtattcttgccttccacggactgaaacagttgaatcaaaacccaagtctc
ggattgaaagccattatagatatctgcggattgaatggtcgtgaattatctatgagcgat
atcatcttcaagattggaccacgtattaacgccagcggccgtatggagaatggcaagaaa
agtgttgacctacttgttgaaagagaatacagtctggcattcgatcaagcaaagcatatt
gacgaatacaacgaacagcgaaaggatgtagaccgtcagatgacagaagaggccaaccag
attgttgctcgtttggagagccagaagcatcaatcaagtatcgttctctatgatgagcat
tggaagaaaggtgtcataggtatcgttgcctctcgtctgactgaaatctatttccgtccg
acagtagtcttaacacgtgacgagaaccttgctacagggtctgcacgtagtgtagctgga
ttcgatgtatatgcagcgattaagagttgtcgtgatttattgttgaactttggtggacat
acatacgcagccggactaaccatgaagtgggcagatgtaaaggagttccgtaaaagattc
caagcctacgtagagcagcacattgagcctgaacagcgtgaggcgatcctcgatatcgat
gctgttatcgactttaaggatataaccaaaaagctacacactgatctgaaacgctttgcc
ccatttggtcctggtaatcccaaaccactcttctgtacgttagatgtttacgactttgga
acgagtaaggttgtaggacgcgagcaagagcatatcaagttggaactggttgactctaaa
tccaacaacgtaatgaatggtatcgctttcggacagagtgcttcagcccgttacatcaaa
tcaaaacgctcgtttgacattgcctacacgattgaagataacgtctttaagcgtggctct
gttcaactgcaaatagaagatatcagacctactgaggattgctaa
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