Prevotella jejuni: CRM71_09930 Help Entry CRM71_09930       CDS       T05287                                  Name (GenBank) type IV secretion protein Rhs Organism pje  Prevotella jejuni SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TcdB_toxin_midN SpvB RHS_repeat Peptidase_M91 FG-GAP_3 FG-GAP DUF6443 Motif Other DBs NCBI-ProteinID:  AUI55690 LinkDB All DBs Position II:complement(238668..248543) Genome browser AA seq 3291 aa AA seqDB search MKTKHYLISAALLTAITAAIAATHIYKGQDSARENNGTSISQETAQTETSTKNVHNAEKA TQGISRTARKEDKSKTTAAATSSVMETTYTADHASGIIGQSDGRVSDNPEDNIFEITVEK VSPNMRAWLVYDLKGVSSGQGISRSINDRTAVGGYLTVLSKEWKTVREEISPEWLKDGRN TVLFTIPTDASYAYSVRNVHIETVADAKTKTNTNKQEEIILSSAPIAYDGQTYLHGFVRG KASRVSVNGTILTVHDGEFEGIVPSTGRQLKLTTTIAGRDINRTITPIQGGRADYARALV SVGGKAEKQFLAHRADSIAIGGNVLSVKAADIARDGRYSITALRETDIPALDYGMTNVTA KGDGYRFLPHGNHFEGKGATVKIKYDRTRIPSGFTEDDINTYYFDQDTRHWVALERVKVD KATACVVSKTTHFTDMINGVIKAPESPQTDGFTPTMMNDIKAADPTAKINLITPPTANNR GSANLQYGFEMPPARNGMAPSLGIQYSSEGGSGWLGEGWNLSVPSITLDTRWGVPRYNTS KETETYLMSGSMLSTMGDDGKMGVAHRGEKMNRKADRQFYTRQGGDFSRIIRKGNSPADY IWEVTDKQGIKYIYGGEGAVLKGTITDASGQSREVITEWKLKRVEETHGDYIEYVYETAD EPVRGGLVAKAIYLKEVRAGNSGQAPHTVVVLEGSKQKRLKNNNARYGFLTSSNRLLEKL TVHFQGSTLRSYAFTYSEGAFNKDVLTGVKQLDDKGVEVSYQKFDYYDDVQAAKGYVPFK EKQEIWNTHNDGLDAGFISPLKEVGGIFSDKPTALGGTTSLSYGGSFYAGAGVDDQSSST SGTIGGSFNYSHDNSKGLLTFADLNGDGLPDKIYQDGGSVYYRPQICTDEKKITYGEPIK VVGISKFSASSSNTFSGGPALKAGWQYIMATVATSTSRTTTKTSVYFSDVNGDGLVDIVS SGKVYFNHIEIDEQGHAIPHFTLSSADTPSPIIYDAKKIDKTIGEVDPAEQAELIKSSPM EDMVRVWQAPKDGIISISGTVSLITPTGEYDTDEYAHADGVRVAIQKGRTELWNKKITKG DATAYNATAQNITVKKGDRIYFRVQSGTEERSNGAFDNVKWAPVITYTGAAETLPGGLST TVYQPQEGAIYGANTLTNVAESASLNLSGKFTKPVTTDDVTLRIVASNELKDSLGNNNPN YKKREIYTRTLAWNEAFDGEIKQTIPNPDGLTNLNFEISSSSNVDWSKIKWTPQIETIGK DGSRQRTTGATHYVLFADMVSEGKPVVLASNVSTLTVTPSITMLPPTVNGMVTMTVKTVD KLLGKKTYTFSGGSLSGDPLIITGISAGKIWIDYFYSGNISGQTVTSAATVSGIGTAQAG FYAQTENKGFGTMYRGWGGFVYNASEGRYSKPIDESLLKLPDSKDAKMDPLTMAFVPIGT DQSSFDRWIGQRAELYLTAKEAGASRLTEQNVILTNPFEHIDNITGVSGTCLQGTGAVAI TQEMVATSDVNQAGIAFTYNDASGKSVTRSTMMDFNGDGFPDIFQKGIIQYTNSQGGISG EKYSGIGTIGSENKSEGWALGSDPIISISSTIAHIAKGKDHSSNQGSSNKAKASMSGSVS IPPSNKDWSTETFMDVNGDGLPDKIIKGNKVRLNLGYNFTEPIDWGIERIQGGKGITYNA NIGGGFNKGSSSFAGGYNVVTSKNGEEYNLSDVNSDGLPDKVWRNGKTIMVALNIGNGFM DAIQWKGLSSLSESASTSEGAEVAFTVNFTPKLIPVKISINPVVSVSHSINRNNYSLQDV DGDGYLDIVESDKESELKVTRSAIGRTNMLKSVTNSLGGTFTLDYEHSTPTYGLPGGKWV MSSVTIDDGIRDDGPMMKTMFAYSDGQKDRHEREFLGFGKVVTKNIDTEQGESAVYRQAV QLYDVSTYYAQGNELGASVEDAKGNKYTETHNEYDGYYLTASGDKYTFTKQQKLCSDRAS AFVPLRYTANKQYEGQATGITTSEAWNEYYLTGYHGELKSYKFSDKGKLGADGSGKFDYQ TAIQYAHNDNKHIFGLPTNVTVTGGDGKIYHQVSATYDLNYADHITLIKQQLGSGEAVSD YTYDAYGNIIKTTLPANSKGQRMWYTYRYEPVMNMYVERIDDAFGYRSEAANFDYRYGMA LRRMDLNHFYYETDIDNLGRVKAVRGPNELATGVPYIIAFDYQPKATFGTNGITAPAYAV TKHYDIQHPSDDMETVTFVDGFGRPVQVKKDGVVTTAAKGSAPKDETVMIVSGRNVYDAF GRVAKAYYPVTEAVGNKTAFNKAFDNVSPTVTVYDVLDRAMKVTLPDNAETKTEYSTDVG SNALVTTVTDALGNRQATYTDGSGKTVKTEQLSGPDGIITTSFEYDGIDRLVKVTDTEGN VTTSVYDMGDRRTEVNHPASGITTFTYDALGNVLTKQTANLKKEGKTINYEYDYGRLTAI NYPDHPENNVKYHYGGINSSHNRIGRLMLREDGSGAIEYYYGKMGEVLKTVRTLIVPNQA VATYVTQWKYDSHNRLLEMIYPDEEKVTYGYNLGGQVDHVRGYKSYGYDYVNKIGYDKFE QRTYLKYCNGAETFYSYDPARRRLQNLVVNAKAGTIMDNAYSYDAVSNVLGVKNNAPLPQ SGKAGGQMSHSYTYDPLYRLASATGTYKGTDNKAASYTLSMGYDNMHRITSKKQHLSQTG VQFEGTLNAGYELAYTYGKDVGRKFQLDNVRDINYRTEETPTESTNINNGHKYTYDANGN LVYINTSRVKKDGKEDEKATEQKYKWDEENRLLAADENGFVSNYWYDADGERTVKTSGEN EAIYVNSEFSGGNTGTARFSLYVSPYLVAGQGGKYTKHIYVGSQRIVSKLGDLASYGADP RRIPYAGNEADGLIINYKDKYAKQLQSIKDNYKAFDQPYNGKDNDDYVDGQGFCCNDATP EAAQARVRTRAVNGNFKPNDDYEKMQFYYHPDHLGSSSYITNLDGEVAQHIEYVPFGEVF IEERNNTWNTPYLFNAKEFDEETGMYYYGARYYEPRLSLWMSVDRFQEKYPNISTYCFSA NNPIGILDIGGDSLRIDNKNLSLLYIDGKLYRQNGIQYTDKLKGFTKKVVSALDVIRKGT EGASMISELQSSSNNFVIKDGASEFKESNATKAYAQQIQNDPSATAQKEALLNKGIDLSG GSGGTIFWNSYGAVLATLEGGQVSKETDLAHEMFHALDANRGLLDSRFENGIKRSEWQAV FRENILREQLGRPLRTHYRTNKDQDGNFVKGSGPFMLSDKNKPILPVWYKR NT seq 9876 nt NT seq  +upstreamnt  +downstreamnt atgaagacaaagcattacctcatatcggcggcattactgacagccatcaccgcagccatc gctgcgacgcatatatacaagggacaggacagtgcacgtgaaaacaacggcacgagtata tcacaggagacagcacagaccgagacgtccacgaagaacgtccataatgcagaaaaagct acgcagggaatatcacggacggcaaggaaggaggataagtcaaagacgacagcagcagca acttcttccgttatggagaccacctacacggcagaccatgcctcgggcatcataggacag tccgacggacgggtttcggacaaccccgaggacaacatcttcgaaataacagtcgagaaa gtctctccaaatatgcgcgcatggttggtctatgacctcaagggcgtaagctctggtcag ggcatcagcaggagcatcaacgatcgcacggctgtcggcggctaccttacggttctttcc aaggaatggaagaccgtcagggaggaaataagccccgagtggctgaaggacggcaggaac accgtcctcttcaccattccgacggatgcttcctacgcctattcggtcaggaacgtacat atcgagaccgtagcggatgctaagacaaagactaataccaataagcaggaagaaataatc ctttcctccgcccccatagcctatgacggtcagacctacctccacggcttcgtgcgaggg aaggcaagccgtgtctcagtgaacggcacaatcctcaccgtccatgacggagaattcgag ggcatcgtgccatcgacgggcagacagctcaagctcacgacaaccattgcgggcagggac atcaacaggacaataacacccatacagggaggtagggcggactacgcccgtgccctcgtg tccgtcggtggaaaggcggagaagcagttcctcgcacacagggcggacagcatcgccatc ggcggcaacgtcctttccgtgaaggctgcggacatcgcaagggatggcagatactccatt acggcactccgcgagacggacattcctgcccttgactacggcatgaccaacgtcaccgcc aagggagacggctaccgctttctgccccacggcaaccacttcgagggcaagggtgcaacg gtgaagataaaatacgaccgcacgcgaatcccgagcggttttacagaagacgacatcaat acctattacttcgaccaagacaccaggcactgggtggctttggaacgtgtgaaggtggat aaggctacagcctgcgtggtatcgaaaacgacgcacttcaccgatatgatcaatggtgta atcaaggcaccggaatctccacagaccgacggatttaccccgacgatgatgaatgacatc aaggcggcagacccgacggcaaaaatcaatcttattactcctcctacggctaacaaccgc ggctcagctaatctacagtatggcttcgagatgccacctgcccgcaatggtatggctcct tctttgggcatacagtacagtagtgaaggaggtagtggatggcttggagagggttggaat ctctctgttccttctattacgttggatactcgctggggtgttccaagatacaatacaagt aaagaaaccgagacttatttgatgtcgggttctatgctttccacgatgggtgacgacggc aaaatgggtgtggctcaccgtggtgagaagatgaaccgaaaagcggacagacagttctac actcggcagggaggagacttcagccgtattatccgaaagggtaattctcctgccgactat atttgggaagtaaccgacaaacaaggaatcaaatatatttatggtggagaaggtgccgtt ctcaaaggtaccatcaccgacgcaagcggtcaaagccgtgaggtgattaccgaatggaag ctcaaacgtgtggaagaaacacacggtgattatatcgaatacgtctatgagacagccgat gaacctgttcgtggtggacttgtagcaaaagctatttatcttaaggaagtacgtgctggt aatagcggacaagcaccccacacagtggttgttttagaaggcagtaaacagaaacgactc aaaaacaacaatgcaagatatggtttcctaacctcatcgaatcgtttgttagagaagcta acggtgcacttccaaggaagtacgctccgcagttatgcctttacctatagcgagggtgcg ttcaacaaagatgtgcttacgggtgtgaagcaactcgacgacaaaggtgtagaagtgtct tatcagaaatttgactattatgatgatgtacaggctgccaaggggtatgtgccttttaag gaaaaacaggaaatatggaatacgcacaatgacggccttgacgcaggatttataagtcct ctcaaagaagttggtggcatattcagcgacaaacctactgccttaggaggaacaacaagc ctttcttatggtggttctttctatgctggagcaggagttgatgatcaaagttcttcaaca agtggcactattggtggttcttttaattactctcatgataattctaagggattattgact tttgcagaccttaacggagatggattacccgacaagatatatcaggatggaggttctgtg tactatcgtccgcaaatatgcacagacgaaaagaaaataacctatggagaacctatcaaa gttgttggtatctctaaattttctgcttcatccagtaatactttctctggaggacctgcc ctcaaggctgggtggcagtatatcatggctactgttgctacaagtacttctcgcacgact accaaaacctctgtatatttcagcgatgttaatggtgatgggcttgtagatattgtttcc agtggtaaggtttattttaatcatatagaaattgacgaacaaggtcatgctattcctcat tttacgcttagcagtgccgatacaccaagccctatcatctatgatgccaagaaaatagat aaaactattggggaggttgatcctgccgagcaagcagaattgattaaatcctctccgatg gaagatatggtacgtgtatggcaggcacctaaagatggaatcatcagcatctcgggtaca gttagtttgattactccaacaggcgaatacgataccgatgagtatgctcatgctgatggt gtgcgcgtagccattcagaaaggtcgtacggaactctggaacaagaaaattaccaaagga gatgcaacggcttataatgctacggcacaaaatatcactgtcaagaaaggcgaccgcatt tatttccgtgtccagtctggtacggaggaaagaagcaacggtgcctttgacaacgtgaaa tgggcgcctgtcattacctatacaggtgcggcagaaacactccccggcggattatctacc actgtttatcaacctcaggagggtgccatttatggtgccaatacactgactaatgtggca gagagcgcttctttgaacctgtcaggcaagttcaccaaacccgtcacaacagatgacgtt acgctcagaattgtcgcatctaatgagttaaaagacagcttgggtaataataatccgaat tataaaaaaagagaaatctatacccgtaccttagcatggaatgaagcgtttgacggagaa attaaacagacgattcctaatccggatggcttgacaaatctaaactttgaaatcagttct tcttctaatgtggactggtcgaaaataaagtggaccccacaaatagagaccataggcaag gatggaagcaggcagcgtacgacaggggcaacccattatgttctctttgctgacatggtt agtgaaggtaaacctgtagtacttgcttccaatgtttcaaccctgacagttactccgagt atcacgatgctaccaccaacggtaaacggaatggtaacgatgactgtcaagactgtagac aaactgctgggtaaaaagacttacactttcagtggtggcagtctttcaggggatcctctg ataatcaccggtatcagtgcaggcaagatatggatagattacttctattcaggtaacatc tcaggtcagacagtaacttctgcagctactgtcagtggcataggaacagcacaggcaggc ttctatgcccagacagagaacaaaggcttcggcacaatgtatcgtggttggggtggtttt gtttataatgcttccgaaggtaggtatagcaaacctattgatgaatcactgcttaagctc cccgatagcaaggatgccaagatggatcctttgacaatggcatttgtaccaataggaaca gaccaaagttcatttgatagatggataggacaacgagcagaattgtaccttacagctaaa gaggctggggcttcaagactaactgaacaaaatgtaatattaactaaccctttcgaacat attgataatataacaggagtttccggtacgtgtctacaaggaaccggtgctgtagctata acacaggaaatggttgcaacaagtgatgtcaatcaggcaggcattgcttttacatacaat gatgcaagtggtaagagtgtaactcgctccactatgatggatttcaatggggatggtttc ccggatatttttcaaaaaggaatcatacaatatacaaattcgcaaggaggtatcagtggc gaaaagtatagtggaatcggaaccattggcagtgaaaataagtctgaaggatgggcattg ggaagtgatcccattatttcgataagttctacgattgctcatattgcaaaaggaaaggat cattccagcaaccaaggctccagcaacaaggcaaaagctagtatgtctggatctgtcagt attcctccctctaacaaggattggagcacagaaacattcatggatgtgaatggagacggt ctacctgataaaattattaagggaaataaagttcgacttaatttagggtacaacttcaca gaaccgattgattggggaattgaacgaatacaaggtggtaagggaattacttataacgcc aatataggtggtggcttcaataaggggtcatcaagctttgccgggggatacaatgttgta acctctaagaatggagaagagtataatctctctgatgtaaattctgacggattaccagat aaggtatggcgcaatggcaagactattatggtggcacttaatatcggtaatggctttatg gatgccattcagtggaaagggctttcttctcttagcgaatcagcctcaacttcagaggga gctgaagttgcatttactgtcaattttaccccaaagttaattcctgtcaaaatttccata aatccagttgtttctgtcagtcatagtataaatcgtaacaactactctctgcaagacgtg gacggcgacggctatcttgacatcgttgagtccgataaagaaagcgaactaaaggttacc cgctctgccatcggcagaacgaacatgctcaagagcgtgaccaactcccttggcggaacc tttacactggactacgaacacagcacgcctacctacggactacccggtggtaaatgggta atgtcgtccgtaaccattgacgatggtatccgtgatgatggaccgatgatgaagacgatg tttgcctattcagatggacagaaagatcgccacgaacgtgagttcctcggttttggaaag gtcgtaaccaagaatatcgacaccgaacagggagaatccgcagtctatcgtcaggctgtg cagctctacgatgtgtccacctactatgcacagggcaatgagcttggagcgtctgtagag gatgccaaaggcaacaagtacaccgagacacacaatgagtacgacggctactacctcacc gccagcggtgacaagtacaccttcaccaagcagcagaagctctgtagcgaccgcgcttct gccttcgtgccgctacgctataccgccaataagcagtatgagggacaggcaactggcatc accacctctgaggcttggaatgagtattacctcactggctatcacggagagctgaagtcc tacaagttcagtgacaagggcaagttgggtgctgacggttcgggtaagttcgattaccaa accgcaatacaatatgctcacaatgataacaaacatatcttcgggctacctaccaacgta accgtaacgggcggtgatggtaagatttatcatcaagtttctgcgacttacgatttgaac tatgccgaccatattacgctgattaagcaacaactcggaagcggcgaagctgtctctgac tatacttatgatgcttacggcaacatcatcaagaccacgcttcctgctaacagcaaggga cagcgcatgtggtacacctaccgctatgagccagtgatgaatatgtatgtggagcgcata gacgatgcctttggctaccgtagcgaggcagccaacttcgactaccgctatggtatggca ctccgccgtatggatctcaaccacttctattatgaaacggatatagacaacctcggacgt gtaaaagctgtgcgtggtcctaatgagttggcaacaggtgtgccgtacatcattgccttt gactatcaacctaaggctactttcggcaccaatggtatcacagcacctgcctatgccgtg actaaacattacgacatacagcacccaagcgatgatatggagaccgtaaccttcgtggat ggcttcgggcgtcccgttcaggtgaagaaagacggtgtggtaacgacagctgccaagggt agtgctccgaaggacgagactgtaatgattgtcagcggacgcaatgtctatgacgctttc ggtcgtgtggctaaggcttactaccctgtaaccgaagcagtgggaaacaagaccgctttc aacaaggcatttgacaacgtgtcgccaactgtaacggtctatgacgtgcttgaccgtgcc atgaaagtaacgcttccagacaatgctgagaccaagacggagtactctacggacgtaggt agcaatgcactcgtaacgactgttactgatgcgttgggtaatcgtcaggcaacctatacc gatggtagtggcaagaccgtgaagaccgagcaactcagtggacccgatggtatcattacc acttctttcgaatatgacggtatcgaccgattggtcaaggtaacagacaccgagggcaac gtaacgacatccgtctatgatatgggcgaccgtcgcacagaggtaaaccaccctgccagc ggtatcaccacctttacctacgatgctttgggcaatgtgctcaccaagcagacagccaac ctcaagaaggagggcaagaccatcaactatgagtatgactatggtcgtctgacggctatc aactatcccgaccatccggagaacaacgtgaagtaccattacggtggtatcaactcttct cacaaccgtatcggcagattgatgcttcgtgaggacggcagtggcgctatcgagtattac tatggtaagatgggtgaggtgttgaagacggtacgcacgctgattgtgcctaaccaggca gtggcaacctacgtaacacagtggaagtatgacagccacaatcgtctcttggaaatgatt taccccgatgaggagaaggtaacctacggctacaacctcggtgggcaggtagaccacgtc cgtggctacaagtcctacggttatgactatgtgaacaagattggctatgataagtttgag cagcgcacctatctgaagtattgcaacggagcggaaacgttctacagctacgaccctgca cgcagacggttgcagaacctcgtggtgaatgctaaggcaggtactatcatggacaatgcc tatagttatgacgcagtgagcaacgtacttggcgtgaagaacaatgctccactcccacag agtggcaaggcaggcggacagatgagccacagttatacttatgacccactatatcgtttg gcaagcgcaacaggtacttataagggaacggacaataaagctgcttcttatacgttatct atgggctacgacaacatgcaccgcatcacgagcaagaagcaacatctctcgcagacaggt gtgcagttcgagggcacgctcaacgcaggctacgaactcgcttatacttacggcaaggat gtgggcagaaagttccagcttgacaatgttcgtgatattaactaccgaacggaagaaact cctacggagagcaccaatatcaacaacggacacaagtacacctatgatgctaacggaaat cttgtctacatcaacacctctcgtgtaaagaaagacggcaaggaagatgaaaaggcaacc gagcagaaatataagtgggacgaggaaaaccgcttgttggcagccgatgagaacggtttt gtaagcaactactggtacgatgccgatggtgagcgcacagtgaagaccagtggcgagaac gaagccatttatgtgaactctgaattctcgggtggcaataccggtacggcacgcttctcg ctctatgtcagcccatacctcgtggcagggcaaggtggcaagtacaccaagcacatctat gtgggtagccagcgtattgtatctaagcttggcgacctcgccagctatggtgcagaccca agacgaataccgtatgcaggcaatgaagccgatggcttgattatcaattacaaggacaag tatgcaaagcaactgcaatccattaaggataactacaaggcgtttgaccaaccttataat ggtaaggacaatgacgactacgtggacggtcagggcttctgctgcaacgacgctacgccg gaggcggcacaagcaagggtacgcacaagagctgtaaacggcaacttcaagccgaacgac gactacgagaagatgcagttctactaccatcccgaccacttgggcagcagtagctacatc accaatcttgacggcgaagtggcgcagcacattgagtatgtgccgtttggcgaagtgttc atagaagagcgcaacaatacgtggaacactccttatctcttcaatgccaaggaatttgat gaggagacgggtatgtactactatggtgcgagatactatgaaccgaggttgagtctgtgg atgagtgtggatagattccaggaaaaatatcctaatataagcacttattgtttctctgct aataatcctataggaatcttggatataggaggagatagtttaaggattgataataagaat ctttctcttttgtatattgatggaaagttatatagacaaaacggcatacaatataccgat aaattgaaaggcttcaccaaaaaagtggtttctgcattagatgtaattcgtaaaggtaca gaaggggcaagtatgatttctgaactccaatcttcatcaaataattttgtcataaaagat ggagcaagtgaatttaaagaaagtaatgctacaaaggcgtatgcccaacaaattcaaaat gatccatcagctactgcacagaaagaagctttgcttaataaaggcattgacctttctggt ggttctgggggcacaatattctggaattcttatggtgccgtattggcaaccttagaagga ggtcaagtaagtaaggagactgatttggcacatgagatgttccatgcgttagatgctaat cgtggacttttagacagtcgtttcgagaatggaattaaacgtagtgagtggcaagccgta tttcgtgaaaatatattgcgagaacagcttggtagaccgttaagaacccattacagaact aataaggatcaagatggtaattttgttaaaggcagtggaccttttatgctttctgataaa aataaacctatattgccagtatggtataagcgttaa

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