Prevotella jejuni: CRM71_15230
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Entry
CRM71_15230 CDS
T05287
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pje
Prevotella jejuni
Pathway
pje03420
Nucleotide excision repair
pje03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pje00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CRM71_15230
03430 Mismatch repair
CRM71_15230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pje03400
]
CRM71_15230
Enzymes [BR:
pje01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CRM71_15230
DNA repair and recombination proteins [BR:
pje03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CRM71_15230
MMR (mismatch excision repair)
Other MMR factors
CRM71_15230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
RNase_T
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
DEDDh_C
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AUI56575
LinkDB
All DBs
Position
II:complement(1613680..1616370)
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AA seq
896 aa
AA seq
DB search
MEENSYTPSLDQYQIPVVESSQGYHLVLASPGCGKTHILAERVRYARERGVKYEDMLCLT
FTNRAAREMTNRIQKVVGGDFSELMVGNVHRFCSKFLFEQGRIPADSAIIDDEEAVSIIA
DYRNEDEEGVTRDFNRYKGYQTIIFFQHFIYQLEHHHPWKYYLHPESFTDGDREAIKHIC
GSQKIDYNEQAVVNIYRHAQEYMDEANAPGLDAKLADRIRVLLWKMYYAGCYARYKEENH
LFDFEDLLLFTYDIYRSDPSCKRYPWIQVDEVQDLNGMQLAIIDLLTAKDNPMVMYLGDE
QQAIFSFMGAKVETLTLLKMRCKGNIHHLQRNHRSPKYLLDVFNDYAEKQLKIDRELLPL
SDNDTKATLGDLRIIHSSTIEAEQKDITAEALRLYEQNREERTAIIVSSNSDADRISEAM
SEAALTHFRVSGRDLFDTPDVKLLLAHLSVLSNEHNSIAWTRIMKGVHAFPSHALARRFN
WKLKQLALTPSDFLLYPESCYTAEFLRAYNEDEIVVFDTETTGLNVFTDDIIEVAAIRIK
GGEVVGEPLDLYIETDKPILPKLGDKENPMYAIYHEKLATGELLPPADALQRFLAYVGTS
PILGHNANYDYNILDNNLQRYCNDTMQAHPIRCFDSLKLIRLLAPSLHSYKLESLLETFH
LTGVNSHQAIDDVRATVSLVRLCAEKAREKQASQEAFIHHPKVKPFANVLRSNYGESYRT
AVNRLYKPSADPELALVSELSTAYKAFRLDGLVNDIPRLDYILRYLRIDMLTDEGVANAL
APQLSQYMMDINTLKEADFCNSKSILERIYVTTVHKAKGLEFDNVIIFDAADGRYPNAYN
KTKQQDEEDARKFYVAMSRAKRRLFIAYALQMVDRHGRVFNRELTPLMESIQKYFN
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaacagttacacacccagtttagaccagtatcagatacctgttgtagagtca
agtcagggctatcaccttgtgcttgcgtcgccaggatgtggtaagactcatatcctcgca
gagagggtgaggtatgcacgagaaaggggtgttaagtatgaggatatgctctgtcttaca
ttcacaaaccgtgctgcgagagagatgaccaaccgtatccaaaaagtagtaggaggtgac
ttctctgagttgatggtaggtaatgtgcatcgtttctgctctaagtttctctttgaacag
ggtcgtataccagccgactcggctattattgacgacgaagaggcggtgagcatcattgca
gactatcgcaatgaagatgaggaaggagtaacaagagacttcaataggtacaaaggctat
cagacaatcatcttctttcagcatttcatctatcagttagaacaccaccacccatggaag
tattacctccatcctgagagctttacggatggtgatagagaagcgataaaacacatctgt
ggctcacagaagattgattataacgaacaggccgtagtgaatatctatcgtcatgcacag
gaatacatggacgaagcgaatgcacctgggcttgatgcaaagttagccgataggatacgt
gtattgctatggaagatgtattacgctggctgttacgctcgttataaagaggaaaaccac
cttttcgatttcgaggacttgctcctcttcacctacgacatctatcgttctgacccaagc
tgtaagcgttatccatggatacaggtcgatgaagtgcaggatcttaacggtatgcaactc
gctatcatcgaccttctaacggcaaaggacaacccgatggtgatgtacttaggcgacgag
cagcaggctatcttctcttttatgggggcgaaagtggagacgttaaccctcttgaagatg
cgctgtaagggtaatatccaccatctacagcgcaatcaccgttcgccaaaatacttgctc
gatgtctttaatgactatgctgaaaagcaactgaagatagaccgcgaactactccctctc
tccgacaacgacacgaaggccacattaggcgacctacgaatcatacatagcagtacgatt
gaagctgaacagaaggatattactgctgaggctctccgcctttatgaacagaatagggag
gagcgtacagctatcatcgtcagctctaattctgatgccgaccgtatcagtgaagcgatg
tcggaggctgccttgacccactttagggtgtctgggcgtgacctcttcgatacaccagat
gtcaagttgttattggctcatttgagtgttctctccaatgaacataactctatcgcatgg
acacgtattatgaagggggtgcatgccttcccttctcatgcccttgctcgccgatttaat
tggaagctgaaacaattagcactaacgccttccgatttccttctctaccccgaaagctgt
tacacagcagagttccttcgtgcctataacgaggacgaaatcgttgtcttcgatactgag
acaacgggtttgaatgtgtttactgatgatatcatagaggttgcggccatacgaataaag
ggtggggaagtggttggcgaaccgctcgacctctacatagagaccgataagccgattctg
cccaagctcggtgacaaggagaacccgatgtatgctatctaccatgagaagctggccacg
ggcgaactgctccctcctgctgatgccctacaacgcttccttgcctacgtcggtaccagt
cctatcctcggccataacgccaactacgattacaacatattagacaacaatctgcaacgt
tactgtaatgacacgatgcaggcacatcctattcgttgcttcgactcgctcaaactgata
agactactggctccgagccttcattcttataagttggaaagcttgctcgaaacctttcac
ttgacgggtgtaaacagtcatcaggcaattgatgacgtgcgggcaacggtcagtcttgtg
cgcctctgtgctgagaaggcacgtgagaaacaggccagtcaagaggcttttatccaccac
ccaaaggtgaagccctttgcaaatgtgctccgaagcaattatggcgaaagctatcgaacg
gccgtcaaccgtctctataagccctctgccgaccctgagcttgcccttgttagtgagctt
tctacggcttataaggcctttcgtctcgacggattagtcaatgacattccccgattagac
tatatccttcgttatctccgtatagatatgttgacggatgagggagttgccaacgccctt
gccccacaactttcgcagtacatgatggatattaacacactcaaagaggccgatttctgc
aatagtaagagtatccttgagcgtatctatgtgacgactgttcacaaggccaagggactg
gagtttgataatgttatcatctttgatgctgctgacggacgctatccaaacgcctacaac
aagacgaagcagcaggatgaggaggatgcccgtaagttctatgtggccatgtcgcgtgct
aaacgtaggctgttcatcgcctatgccctacagatggtcgaccgccacggtagggttttc
aatcgtgaactaacacctctgatggagagcatacagaagtattttaattag
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