Pantoea jilinensis: KTJ90_12710
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Entry
KTJ90_12710 CDS
T08640
Symbol
ldtD
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
pji
Pantoea jilinensis
Brite
KEGG Orthology (KO) [BR:
pji00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pji01002
]
KTJ90_12710 (ldtD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pji01011
]
KTJ90_12710 (ldtD)
Peptidases and inhibitors [BR:
pji01002
]
Cysteine peptidases
Family C82
KTJ90_12710 (ldtD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pji01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
KTJ90_12710 (ldtD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
DUF4389
Motif
Other DBs
NCBI-ProteinID:
QXG53485
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Position
complement(2700467..2702278)
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AA seq
603 aa
AA seq
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MLRVKKLHHHRVVSLLALALSVVPFTLPQAAVIAALPGTSQAAISVSDSQQRIRQAFSSA
DQPFYLGPLATLYASRHMQPLWQDPQAVQKFQQQLAEVALSGVQPQFTRWIERLTNPAIT
GFARDIALSDAMLGYLQFVSNVPTQGETWLYSNIPYRLTQPSVAVVNQWQNAVNAGSDNA
FIASLQPQHPQYQPMHAALITLLSDKQPWPQLKSSETLRPGQVSDDVPALREILQRSGML
TAQVNAPTPNDDAVPVAASPVTHSDQPVAVSPSAAPVSNLLTPSPQSPGNVQSQTLEGNT
ANIYDETLVAAVKRFQQWQGLDGDGAIGARTRQWLNVSPQMRASLLALNIQRLRLLPDDM
HNGIMVNIANYSLIYYNNGNKILSSRVIVGRPDRKTPLMRSALNNVVLNPPWNVPTTLVR
KDIIPKVKLDPTYLYKHGYTLLSGWSADAEVIDPSMIDWRMVTASSFPYRLIQAPGEANA
LGRYKFNMPSSDAIYLHDTPNHNLFQRDIRALSSGCVRVNKASELAGLLLQDAGWNDARI
SSTLKEGDTRYVPIRHRIPVNLYYLTAWVADDGIPQFRTDIYNYDDTARSGSQALSRAEQ
LLL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgggtaaaaaaattacatcatcatcgcgttgtatcattgctggcgctggcgcta
tccgttgttccatttacgctaccgcaggctgctgtcatcgccgctttgcctggaactagc
caggcggccatctccgtatccgacagtcagcagcgcattcggcaggcgttctccagcgcc
gaccagccattttatctgggaccgctggcaacgctttatgcatcccgtcatatgcaaccg
ctctggcaggatcctcaggcggtgcaaaaatttcagcagcagctggcagaagtggcgctg
tctggcgttcagccgcagttcacgcgctggattgagcgtctgaccaaccccgccattacc
ggctttgcccgggatattgcgttgtctgatgcgatgctgggttatctgcaatttgtgtcg
aatgtgccgacgcagggtgaaacctggctctacagcaatattccctacaggctgacccag
ccctccgtggcggtggttaatcagtggcagaatgcggtcaatgccggttctgacaatgca
tttattgcctccttacagccgcagcatccacagtatcagcccatgcatgctgcgcttatc
accctgcttagcgataagcagccctggccgcagctgaaaagcagtgaaacactgcgtccg
ggccaggtcagtgatgacgtgcctgcgctacgcgaaattttgcagcgcagcggcatgtta
acggcgcaggttaacgcgccgacacccaatgacgatgcggtacccgttgccgcctcgcca
gtaacgcacagcgatcagcctgttgcagtcagtccttctgccgcgccagtcagcaatctg
ctcaccccatcaccacaatcaccgggtaacgtacagagtcagacgctggaaggaaatacc
gccaatatttatgatgagacgctggtggcggcggtgaagcgtttccagcagtggcaggga
ctggatggtgatggggctatcggtgccagaacccgtcagtggcttaacgtctctccgcag
atgcgtgcgtcgttactcgcgctgaacattcagcgtctccgcctgctgccggacgatatg
cataacggcatcatggtgaacatcgccaactactcgctgatttactacaacaatggcaat
aagatcctctcatcacgcgtcatcgtcggacgtccggaccgtaaaacgccgttgatgcgc
agcgcactcaataatgtggtgctgaatccgccgtggaatgtgccaacaacactggtgcga
aaagatattattccaaaagtgaaactggatccgacctatctttacaagcatggttatacc
ctgctgtcgggctggagtgctgacgctgaagtgattgatcccagcatgatcgactggcgt
atggtcaccgcctcatcattcccttatcgcctgattcaggcaccgggggaggcgaatgcg
ctgggccgttataaatttaatatgccaagctcagatgcgatctacctgcatgacacgcca
aaccataatctgttccagcgtgatatccgcgcgctcagctccggctgtgtccgggtgaat
aaagcatctgaactggcgggattattactgcaggacgcgggctggaacgatgcgcgtatt
tccagcacgttaaaagagggcgacacccgctatgttccgattcgccatcgcattccagtg
aatctctattatcttacggcgtgggtcgctgatgatggcataccccagttccgcacagat
atttacaattatgatgacaccgcccgttcgggcagtcaggctctcagtcgggctgagcag
ttactgctctag
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