Pantoea jilinensis: KTJ90_13575
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Entry
KTJ90_13575 CDS
T08640
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pji
Pantoea jilinensis
Pathway
pji03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pji00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KTJ90_13575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pji03000
]
KTJ90_13575
03400 DNA repair and recombination proteins [BR:
pji03400
]
KTJ90_13575
Enzymes [BR:
pji01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
KTJ90_13575
Transcription factors [BR:
pji03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KTJ90_13575
DNA repair and recombination proteins [BR:
pji03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KTJ90_13575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QXG53653
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All DBs
Position
2902768..2904255
Genome browser
AA seq
495 aa
AA seq
DB search
MLDPDIAYQALTSRDTRFDGVFFVGVTSTGIYCRPICPVKAPMQKNCLFFSSAEAAEKAR
FRPCLRCRPELAPGNAPVDQPHRVAEQLIQRIEEGMLEEREGLEAIAAEFSLSLRQLRRI
VQHELGVSPLELKQTRRMLLAKQLLTETQLPVTEVAYASGFSSLRRFNDVFQARYRMTPS
ALRRDDTGAKRAQPGDRVTLRLAYRPPYDWAAMLWFLQTHLMKEVEAVEDGCWRRTVALG
RFRGWVSVSHLPQKNALQVTLSTSLTPVLPLLLRRLRDLFDLDAQPQRIAACLAQDPLLA
PSLIAHPGLRVPGAFDAFELGVRAIIGQQVTVKAATTVSSRFAAAFGEPCETPFADLTRY
TALPERIAALTVDDVAPMGIVSAARSRAIIAFATACASGDLRLSAAQPPDEVIKKLVSLP
GIGPWTAHYIAMRALRWPDAFPKEDIAIRNNLGGMSSKEAEARSQSWRPWRSYAVMHIWE
SLAVAKVKKKPCRSM
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcccgacattgcctatcaggcgctgacctcacgtgatacccgcttcgacggc
gttttctttgtgggcgtgacctcaaccggtatctattgccgcccaatttgcccggtcaaa
gcgccgatgcagaaaaactgtcttttcttcagcagcgccgaggcggcggagaaagcgcgc
tttcgcccctgcctgcgctgccggcctgagctggctcccggcaatgcgcctgtcgatcag
ccgcatcgcgtggcggagcagctgattcagcgcattgaggaaggcatgctggaggagcgc
gaaggtctggaggcgattgccgctgagttcagtctcagcctgcgtcagctgcgccgtatc
gtgcaacatgaactcggcgtctcaccactggagctgaagcaaacacggcgtatgctgctg
gccaagcagttgctgacagaaacacaactgccggtcacggaggtcgcctacgccagtggc
ttcagcagtctgcgccgttttaatgatgttttccaggctcgctaccgcatgacgccaagc
gcgctgcgccgcgacgatacaggcgcgaagcgtgcgcagcccggcgaccgcgtgacgctg
cggctggcctatcgcccgccctacgactgggcggcgatgctctggtttttgcagacacac
ctgatgaaggaagttgaggcagtggaagatggctgctggcgacgcaccgtggcgctggga
cgttttcggggctgggtcagtgtatcccatctgccgcagaagaacgcgctgcaggtgacg
ctctcaacctcactgacgccggttctgccgctgctgctgcgccgcctgcgcgatctgttt
gacctggacgcgcagccgcagcgtatcgccgcctgtctggctcaggacccgctgctggca
cccagcctgattgcacatcctggtctgcgtgtgccgggcgccttcgacgcttttgaactt
ggcgtgcgtgctattatcggccagcaggtgaccgtcaaagccgccaccacagtcagcagc
cgttttgccgccgcctttggcgagccctgtgaaacgccctttgccgacctgacccgctac
accgcgcttcctgaacgcatcgcagcgctgacggtggatgacgttgcgccgatgggcatc
gtcagcgccgcccgctcccgcgccatcatcgcctttgccaccgcctgcgccagcggcgat
ctgcgtctcagtgccgcgcagccgcctgatgaggtaataaaaaagctggtcagcctgccg
ggcattggtccctggaccgcgcactatatcgcgatgcgcgccctgcgctggccggatgcc
tttcccaaagaggatatcgccatccgtaataacctgggcggcatgtcatctaaagaagca
gaagcgcgctcgcaatcctggcgtccctggcgcagctatgcggtgatgcatatctgggag
agcctggcagtggcgaaggtgaagaaaaagccgtgccggtcaatgtaa
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