Pantoea jilinensis: KTJ90_14780
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Entry
KTJ90_14780 CDS
T08640
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pji
Pantoea jilinensis
Brite
KEGG Orthology (KO) [BR:
pji00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pji03400
]
KTJ90_14780 (sbcD)
DNA repair and recombination proteins [BR:
pji03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KTJ90_14780 (sbcD)
Archaeal homologous recombinant proteins
KTJ90_14780 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QXG53874
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All DBs
Position
3142728..3143927
Genome browser
AA seq
399 aa
AA seq
DB search
MRIIHTADWHLGQFFYNKSRAAEHQAFLDWLLIQIEQHQVDALIIAGDLFDTGTPPSYAR
EMFNRFVVALQPTGCQLIVLAGNHDSVATLNESRELLACLNTRVIATPQEQDDVLLLNTR
QGEPGALLCAIPYLRPRDILRSRAGQSGRDKQTSLLEAIAHHYQQRFAAAQALGHALPII
ATGHLTTVGVSQSDSVRDIYIGTLDAFPASAFPAADYIALGHIHRAQRVAGSEHIRYSGS
PIPLSFDELGSEKSVFLLELAASGLQSVTPLVVPQAQPMQVLKGSLAQIAEQLHAFSTAE
QEKPTWLDIEVTTQEYLSDLQHQVETLTATLPVEVLLLRRSREQRQQSLARLDNETLSEL
KVEEVFARRLALDEELQPAQIDEMTTLFRQTLAAMEETQ
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcattcatactgcggactggcatctggggcagttcttttacaacaaaagtcgg
gcagccgaacatcaggcgtttctcgactggctgttgatccagattgaacagcatcaggtg
gatgcgttgattattgcaggcgatctgtttgataccggcacgccgcccagctacgcccgc
gagatgtttaaccgctttgtggtggcgctgcagcccaccggttgtcagctgattgtgctg
gcgggcaaccacgattccgtggcgacgctgaatgagtcgcgcgaactgctcgcctgtctc
aacacccgggtaatcgccaccccccaggagcaggatgatgtgttgctgctgaacacccgc
cagggcgaaccgggcgcgctgctctgtgccattccttatctgcgaccgcgcgatattctg
cgcagccgggcgggtcagtcagggcgcgataaacagacctcgctgctggaggcgattgcc
catcactatcagcaacgcttcgccgccgcccaggcgctgggtcatgcattgccgattatc
gctaccggacatctcaccaccgtcggggtcagccagagcgattcggtgcgtgacatctac
atcggtacgcttgatgccttccccgccagtgcctttccggccgctgactacattgcactg
ggccatattcatcgcgcccagcgcgtggcgggcagcgagcatatccggtacagcggttcg
cccattccgctgagttttgatgagctgggcagcgaaaaaagcgtctttctgctggagctt
gcggcaagcggcctgcaatccgttacgccgctggtggtgccgcaggcgcagccgatgcag
gtgctgaaaggatcgctggcacagattgcggaacagttacacgccttcagcacggctgag
caggagaagccaacctggctcgacatcgaagtcaccacgcaggagtacctcagcgatctg
cagcatcaggtcgaaaccctgaccgccacgctgccggttgaagtcctgctgctgcgccgc
agccgcgagcagcggcagcagagcctggcgcggctcgacaacgaaaccctgagtgagctg
aaagtggaagaggtctttgcccgccggctcgcgctggatgaggagctgcagcctgcgcaa
atcgacgagatgaccaccctgttccgccagacgctggccgccatggaagagacccaatga
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