Pantoea jilinensis: KTJ90_15365
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Entry
KTJ90_15365 CDS
T08640
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pji
Pantoea jilinensis
Pathway
pji03030
DNA replication
pji03430
Mismatch repair
pji03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pji00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KTJ90_15365 (dnaE)
03430 Mismatch repair
KTJ90_15365 (dnaE)
03440 Homologous recombination
KTJ90_15365 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pji03032
]
KTJ90_15365 (dnaE)
03400 DNA repair and recombination proteins [BR:
pji03400
]
KTJ90_15365 (dnaE)
Enzymes [BR:
pji01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KTJ90_15365 (dnaE)
DNA replication proteins [BR:
pji03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KTJ90_15365 (dnaE)
DNA repair and recombination proteins [BR:
pji03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KTJ90_15365 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QXG53980
LinkDB
All DBs
Position
complement(3259795..3263277)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMVDGLAKTGPLIKKAAALGMPAIAITDFTNLCGLVKFYGGAHSA
GIKPVIGADFNVASELMGDELTQLTVLASSNTGYQNLTLLISRAYQRGYGVDGPIIDRDW
LIELQEGLILLSGGRRGDVGRSLLRGNNALVSQCLSFYQQHFPDRYYLELIRTGRQDEES
YLHAAVELAIAEGIPVVATNEVCFINAEDFDAHEIRVAIHEGYTLDDPKRPRNYSPQQYM
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDYLVVKSREGL
EERLAFLFPDEAERAEKRPEYDERLEIELTVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDIDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLEKAFIAEPQ
LPAMYDADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEHGQFPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRREKQGLEPIDIASIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSIFRDGAESMGIDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYPFHVNDAGEIVYGIGAIKG
VGEGPIEAIIDARNEGGYFRELFDLCARTDTKKINRRVMEKLIMSGAFDRLGPHRAALMS
SLSDALKAADQHAKAEAIGQADMFGVLAEEPEQVEKSYASVTPWPEQVQLDGERETLGLY
LTGHPINQYLKEIERYVGGVRLKDMHPTDRGKITVAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVNLYYQRADARAKLRFGAAWRISPSD
RLLNDLRSLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccccgttttatacatctgcgtgtccacagtgactattcgatggttgatggc
ctggcaaaaaccgggccgctaatcaagaaagcggctgcccttggcatgccggcgatagcg
attaccgacttcactaacctctgtggcctggtgaaattctacggtggcgcgcacagcgca
gggataaagccggtcattggtgccgatttcaacgtggccagtgagctgatgggggatgag
ctgacacagcttaccgtactggcgtccagtaataccggataccagaacctgacgctgctg
atctcccgcgcctatcagcgcggttatggcgtggacggacccattatcgatcgcgactgg
ctgatcgaattgcaggaaggattaatactgttgtcgggtgggcgacgcggcgatgtaggt
cgtagcctgctgcgcggtaacaatgcgctggtgtcgcagtgcctgtcgttttaccagcaa
catttccccgatcgctactacctggagctgatccgtactggccgacaggacgaagagagc
tatctgcatgcagccgttgaacttgcgattgcagagggaataccggtcgttgccaccaat
gaagtctgctttatcaatgcagaagatttcgatgcgcacgaaattcgcgttgccattcat
gaaggctatacgctggatgatcccaagcgtccgcgcaactacagtcctcagcaatatatg
cgcagcgaagaggagatgtgcgagctgttctcggacatcccggaagcgctggagaacagc
gtagagattgctaagcgttgtaacgtgacggtgcgactgggcgaatatttcctgccacag
ttcccgaccggtgatatgactaccgaagattatctggtggtgaaatcccgcgaggggctg
gaagagcgcctggcgttcctgttcccggacgaagctgagcgcgcagaaaaacgtccggaa
tatgatgagcgtctggagattgagctcaccgttattaaccagatgggattccccggctac
ttcctgatcgtgatggagttcatccagtggtccaaggataacggcgtgccggtgggccca
ggtcgtggctccggtgccggttcgctggtggcctatgcgctgaaaatcaccgatatcgat
ccgctggaatttgacctgctgttcgaacgtttcctgaacccggaacgcgtctcgatgccc
gacttcgacgtcgatttctgcatggagaagcgcgatcaggtcatcgaacacgtcgctgat
atgtacggacgtgaagcggtttcccagattatcaccttcggtaccatggcggcgaaagcg
gttatccgcgatgtgggccgcgtgctgggtcatccttacggctttgttgatcgcatttca
aaactgatcccgcccgatcccggcatgacgctggaaaaagcctttattgctgaaccgcag
cttcctgcgatgtatgacgcagatgaagaggtgaaggcgctgatcgatatggcgcgtaag
ctggaaggggtcacgcgaaacgccggtaaacatgcgggtggcgtggtcattgcgccaacg
aaaatcacggatttcgcgccgctttactgcgatgaacacgggcagttcccggtcactcag
ttcgataaaaatgatgtggaatatgccggcctggtgaagttcgacttcctgggtctgcgt
acgctgaccatcatcgactgggcgctgaagatgatcaacccgcgccgggagaagcagggg
ctggagccgatcgatatcgcctcaatcccgctggatgataagaaaagcttcgatatgctg
cagcgctcggaaaccacagcggtattccagcttgaatcgcgcggcatgaaagatctgatt
aagcgtctgaagcccgactgcttcgaagatatgatcgcactggtggcgctgttccgtcct
ggcccactgcagtccggcatggtagataactttattgaccgtaagcatggccgtgaagcg
atctcttatcccgacattcagtggcagcacgaaagcctgaagccggtgctggaaccgact
tacggcatcatcctctatcaggaacaggtgatgcagatcgcccaggttctctccggttac
accctgggcggcgcagatatgctgcgacgcgccatgggtaaaaagaaacccgaggagatg
gccaaacagcgctccatattccgcgatggtgccgaaagcatgggcatcgacggcgaactg
tcgatgaagatcttcgatctggtagaaaaatttgcaggttatggctttaacaagtcacac
tctgcggcttacgcactggtctcctatcagaccctgtggctgaaagcgcactatccggcc
gagttcatggcggcggtgatgaccgccgatatggataacaccgagaaagtggtgggcctg
gttgatgagtgctggcggatggggctgaaagtcctgccgcccgatattaactcgggtctc
tatcccttccatgttaatgacgcgggcgagattgtttatggtatcggcgcgatcaaaggc
gtgggtgaaggcccgattgaagcgattatcgacgcccgtaatgaaggtggctatttccgc
gaactgtttgatctctgtgcccgtactgacactaaaaagatcaaccgtcgggtgatggaa
aaactgattatgtccggggctttcgatcgccttggaccgcaccgcgccgccctgatgagt
tcactcagtgacgcgttaaaagccgccgatcaacacgcgaaagcggaggcgattggccag
gcagatatgtttggcgtgctggcggaggagccggagcaggttgagaaatcgtacgccagc
gtcacgccgtggcctgagcaggtgcagctggatggtgagcgggaaacgctggggctatat
cttaccggccacccgattaatcagtatctgaaagaaattgagcgttatgttggcggggtg
cgtctgaaagatatgcatcctaccgatcggggtaaaattactgtggcggctggtctggtg
atcgccgcgcgggtaatggtcaccaagcgcggcaaccgaattggtatctgtactctggac
gatcgctccggtcgtcttgaggtgatgttatttaccgatgcgttagataaataccagcag
ttgctggagaaagaccgaatcctgatcgtcagcggacaggtcagctttgatgacttcagt
ggcgggcttaaaatgaccgcgcgtgaagtcatggacatcgacgaagctcgcgaaaaatac
gcgcgcggacttgctatctcgctgacggacaggcaaattgatgaccagctattaaaccgg
ctccgtcagtccctggaacctcatcgttcagggactattccggtgaatctctactatcag
agagccgacgcgcgagcgaagctgcgctttggtgcagcgtggcgaatttcgcccagcgat
cgtttacttaacgatctgcgctcgttgattggatcggagcaggtggaactggagtttgac
tag
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