Pantoea jilinensis: KTJ90_18210
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Entry
KTJ90_18210 CDS
T08640
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pji
Pantoea jilinensis
Pathway
pji03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pji00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KTJ90_18210 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pji03019
]
KTJ90_18210 (recQ)
03400 DNA repair and recombination proteins [BR:
pji03400
]
KTJ90_18210 (recQ)
Enzymes [BR:
pji01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KTJ90_18210 (recQ)
Messenger RNA biogenesis [BR:
pji03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KTJ90_18210 (recQ)
DNA repair and recombination proteins [BR:
pji03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KTJ90_18210 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QXG54485
LinkDB
All DBs
Position
complement(3894882..3896711)
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AA seq
609 aa
AA seq
DB search
MATSAVLNQEALAQQVLQDTFGYQHFRPGQQTIIHQALSGRDCLVVMPTGGGKSLCYQIP
ALVREGLTLVVSPLISLMKDQVDQLLANGVAAAYLNSTMTRDQQQTVMADCRTGRVKLLY
IAPERLMMDNFLESLAHWQPAMLAVDEAHCISQWGHDFRPEYGALGKMRQRFPELPVMAL
TATADETTRNDIVNLLHMQDPLIQISSFDRPNIRYTLVEKFKPTDQLLRYVQDQRGKCGI
IYCNSRAKVEDTAARLQSRGFSVGAYHAGIDSEQRGRVQEAFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMAWLRKCLEEKVPGPL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQQPCGNCDICLDPPKRYDGLVEAQKAL
SGIYRVGQRFGMGYIVEVLRGSNNQRIREQGHDKLPVYGLGKDQSHEHWVSVLRQLIHLG
LVTQNIAMHSALQLTEAARPVLRGEVPLMLAVPRLITAKTKSSSPAKFLGGNYDRKLFAK
LRKLRKAIADEENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGHRKLERFGKPFLVM
IKEHLDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacctcggcagttctcaatcaggaagcgctggcgcagcaggtattgcaggatacc
ttcggctatcagcattttcgtcccggtcagcagacgatcattcatcaggcgctaagcggg
cgcgattgcctggtggtgatgcccactggcggagggaaatcgctttgttatcagattccg
gcgctggtgcgcgagggactgacgctggtggtgtcaccgctgatctctctgatgaaagat
caggtcgatcagctgctggcgaatggcgtggcggcggcgtatctcaactccaccatgacg
cgcgatcagcagcagacggtgatggcagactgccgtaccggtcgggttaagctactttat
atcgctcccgaacgcctgatgatggataacttcctggaaagtctggcgcactggcagccc
gcgatgctggccgtggacgaagcgcactgcatttcccagtggggccacgatttccgtccg
gaatatggcgcactcggaaagatgcgtcagcgcttcccggaattaccggtgatggcactg
accgcgacggcggatgaaaccacccgcaatgacatcgttaacctgctgcacatgcaggat
ccgctgatccagatcagcagctttgaccgtcctaatatccgttacacgctggtggagaaa
tttaaacccaccgatcagctgctgcgctacgttcaggatcagcgcggtaagtgcggcatt
atctactgcaacagccgggcgaaggtggaagacaccgccgcgcgtctgcaaagccgtgga
ttcagcgtgggcgcctatcatgccggaatcgatagcgaacagcgtggccgggtgcaggaa
gcgtttcaacgtgacgatctgcaaatcgtggtggcgacggtggcctttggcatgggtatc
aacaaacccaacgtccgttttgtcgttcacttcgatattccgcgtaatattgagtcctat
tatcaggaaaccggccgggccggacgtgatggtctgcccgccgaagcgatgatgctctac
gatccggccgatatggcctggttgcgtaaatgcctcgaagagaaagtgccagggccgctg
caggatattgaacgccacaagctcaatgcgatgggcgcgtttgcggaagcgcagacctgc
cggcgtctggtgctgctgaactattttggcgagggtcgccagcagccatgcggcaactgc
gatatctgtctcgatccgcctaaacgctatgacggtctggttgaagcgcaaaaagcgctt
tccggtatctaccgtgttggtcagcgttttggcatgggctatatcgttgaggtgctgcgc
gggtctaataatcagcgtattcgtgaacagggtcatgacaaactgccggtttatggactg
ggcaaagaccagagccacgaacactgggtcagtgtgttacgtcagttaatccatctgggg
ctggtgacgcagaacatcgctatgcattcggcgttacagttgaccgaagcagcgcgcccg
gtgctgcgcggtgaagtgccactgatgctggcagtgccgcgattgattactgcgaaaaca
aaaagcagcagtccggcgaagtttctcggtggcaattacgaccgcaagctgttcgccaag
ctgcgtaagctgcgaaaagcgatcgccgacgaagagaatattcccccctatgtggtgttc
aatgacgccacactgatagagatggcagaacagatgccggtcagcgcgtcggagatgctc
agcgtcaacggcgtgggccaccgcaaactggagcgctttggcaaacctttcctggtgatg
atcaaagagcatcttgatgatgaagaataa
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