Parabacteroides johnsonii: LK449_03010
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Entry
LK449_03010 CDS
T07907
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
pjo
Parabacteroides johnsonii
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pjo03032
]
LK449_03010
03036 Chromosome and associated proteins [BR:
pjo03036
]
LK449_03010
03400 DNA repair and recombination proteins [BR:
pjo03400
]
LK449_03010
DNA replication proteins [BR:
pjo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LK449_03010
Chromosome and associated proteins [BR:
pjo03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LK449_03010
DNA repair and recombination proteins [BR:
pjo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LK449_03010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-DNA_bdg
RTT107_BRCT_6
Motif
Other DBs
NCBI-ProteinID:
UEA91202
LinkDB
All DBs
Position
complement(685702..685974)
Genome browser
AA seq
90 aa
AA seq
DB search
MTKADIVSEISKSTGIDKQTVLSSVESFMDIVKSSLSQGENVYLRGFGSFVIKKRAQKTA
RNISKNTTIIIPEHNIPSFKPAKTFLNEVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcagatattgttagcgaaatttcaaaaagcactggcattgacaaacagaca
gtgttgagcagcgtagaatcttttatggatatcgtaaaaagttcattgtctcagggcgaa
aacgtatacctgagaggttttggaagtttcgtgattaaaaagagagcccagaagacagct
cgtaatatttcaaaaaatactacgatcatcatcccggaacataatattccgtcattcaag
ccggctaagactttcctgaatgaagtaaagtaa
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