Parabacteroides johnsonii: LK449_03300
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Entry
LK449_03300 CDS
T07907
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
pjo
Parabacteroides johnsonii
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pjo02022
]
LK449_03300
Two-component system [BR:
pjo02022
]
NtrC family
Unclassified
LK449_03300
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA
HTH_50
AAA_5
HTH_30
HTH_28
AAA_16
P22_Cro
AAA_19
MCM
nSTAND3
ATPase
AAA_2
HTH_1
AAA_7
NAPRTase_N
AAA_22
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
UEA91257
LinkDB
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Position
757565..758938
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AA seq
457 aa
AA seq
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MILIIDDDAAVRSSLTFLLKRAGFEPEAVPGPEEALAVVRRMVPQLILMDMNFTLTTTGE
EGIQLLKQVKIFQPDVPVILMTAWGSISLAVQGMQAGAFDFVTKPWNNLVLLKSIRTAIE
LSEQKKELETPLNRLDADNKFHFDKIIGQSAPLMDVLGTVSRIAPTNASVLITGESGTGK
ELIAEAIHTNSPRTKEPFVKVNLGGLSQSLFESEMFGHKKGAFTDAYIDRTGRFEMANKG
TIFLDEIGDLELSCQVKLLRVLQDQTFEVLGDSRPRKVDIRVVSATNRNLREMVAERMFR
EDLFYRINLITVHLPALRDRKDDIPLLARYFADKQSEINGLPTVRFSSEALTFLQKLPYP
GNIRELKNLVERTILVSGKAVLEASDFEGQCLHTTLSAKAEGAPSFEGLTLDELEKQTIL
QALKTHAGNLSHAAMALGISRAALYRRLEKYDIPVDK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgataatagacgatgatgcagccgttcgttcttcgttaactttcttgttgaaa
cgggccgggttcgagccggaagctgttccgggaccggaagaggcattggctgttgtacgc
cggatggtgccacagttgatcctgatggatatgaactttacactgactacgaccggtgaa
gaggggatacaactgctgaagcaggtgaagattttccagcctgacgtcccggttatcctg
atgacggcatggggatccatttcgcttgccgtgcaggggatgcaggcaggagcttttgat
tttgtgaccaagccttggaacaatctcgttctgctgaaatccatccgtacggcaatcgaa
ctgagcgaacagaagaaggaactggaaacacctttgaaccgcttggatgccgataataaa
tttcattttgataagatcattggccagagtgccccgttgatggatgtgttggggacggtt
tcccggattgctccgaccaacgcttccgttctgataaccggcgagagcggaacagggaag
gagctgattgccgaggcgatccatacgaacagccctcgtacgaaagagccgtttgtaaag
gtcaacctcggcgggctttcacaaagtcttttcgagagcgagatgttcgggcataagaaa
ggagcgtttactgacgcttacatcgaccgtaccggacgtttcgagatggcaaacaagggg
acgatctttcttgacgagatcggtgatctcgaactgtcctgccaggtaaagctgctacgt
gtcctgcaagaccagacattcgaggttttgggtgatagccgtcctcgcaaagtcgatatc
cgtgtggttagtgcgacaaaccgcaacttgcgcgaaatggtggctgaacgcatgttccgg
gaagatttgttttatcgtatcaacctaataactgttcatctgcctgcgcttcgcgatcgt
aaagatgatatccctttgttggcacgttattttgccgataaacaatcagagataaacggc
ttgcctactgtccgtttttcatccgaagctttgaccttcctgcaaaaactgccttatccg
ggtaatatccgtgagttgaagaatttggtggagcggacgatactggtatcgggcaaggct
gttttggaggcctctgacttcgagggccagtgtcttcatacgacattgtcggcaaaggct
gaaggggctccttcgtttgaaggcctgacattggatgagttggaaaagcaaacgattctc
caggcgctgaaaacacatgccggtaatctttcacacgctgccatggcactcggtatcagt
cgggcggccctgtaccgccgtcttgagaaatatgatattcctgtagacaaataa
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