Parabacteroides johnsonii: LK449_04705
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Entry
LK449_04705 CDS
T07907
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pjo
Parabacteroides johnsonii
Pathway
pjo00521
Streptomycin biosynthesis
pjo00523
Polyketide sugar unit biosynthesis
pjo00541
Biosynthesis of various nucleotide sugars
pjo01100
Metabolic pathways
pjo01110
Biosynthesis of secondary metabolites
pjo01250
Biosynthesis of nucleotide sugars
Module
pjo_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LK449_04705 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LK449_04705 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LK449_04705 (rfbC)
Enzymes [BR:
pjo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LK449_04705 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UEA91511
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All DBs
Position
1096505..1097062
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AA seq
185 aa
AA seq
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MTYIETEIPGVWIIEPKVFKDARGYFMEAWKKAEFEEHIGKVEFVQDNESCSSKGVLRGL
HYQLAPYSQSKLVRVIKGCVLDVAVDLRKGSPTFGKYVAVELSDENKRQFFIPQGFAHGF
HVLSEEAVFTYKVDNPYTPTHERGLRFDDPVVGVDWKIMDLSILNLSDKDRNAPLLQDAE
INFKY
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgacatatattgaaactgaaattcccggcgtgtggatcattgaaccgaaagtttttaaa
gatgcacgcggttattttatggaggcttggaagaaggctgagtttgaagagcatatcggc
aaagtggaatttgtgcaggataacgagtcttgttcgtcgaaaggcgtgttgcgaggtttg
cattaccaactggctccttactcgcagtccaagttggtacgtgtgataaaaggatgtgtg
ttggatgtggctgtcgatctgcgcaaaggttctccgacatttgggaagtatgttgccgta
gagttgtcggacgagaataaacgtcagttttttatcccgcaaggattcgctcacggtttc
cacgtcttgagcgaggaggctgtttttacttataaggtcgataatccttatacgcctacc
catgaacgcggattgcgttttgatgatcctgtagtcggtgtggattggaagatcatggac
ctgtctattctcaacttgtcggataaagacaggaacgcccccttgttgcaagatgcagaa
ataaactttaaatattaa
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