Parabacteroides johnsonii: LK449_04710
Help
Entry
LK449_04710 CDS
T07907
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pjo
Parabacteroides johnsonii
Pathway
pjo00521
Streptomycin biosynthesis
pjo00523
Polyketide sugar unit biosynthesis
pjo00525
Acarbose and validamycin biosynthesis
pjo00541
Biosynthesis of various nucleotide sugars
pjo01100
Metabolic pathways
pjo01110
Biosynthesis of secondary metabolites
pjo01250
Biosynthesis of nucleotide sugars
Module
pjo_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LK449_04710 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LK449_04710 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LK449_04710 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LK449_04710 (rfbB)
00525 Acarbose and validamycin biosynthesis
LK449_04710 (rfbB)
Enzymes [BR:
pjo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LK449_04710 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
NifZ
Motif
Other DBs
NCBI-ProteinID:
UEA91512
LinkDB
All DBs
Position
1097115..1098254
Genome browser
AA seq
379 aa
AA seq
DB search
MKTYLVTGAAGFIGANFIKYMLAKYLGIKIVVLDLLTYAGNLGTIAEDIDGERCEFVKGD
ICDRALTDGLFAKYQFDYVVNFAAESHVDRSIENPQLFLVTNILGTQNLLDSARKAWVTG
KAATGYPEWREGVRFHQVSTDEVYGSLGAEGYFHETTPLDPRSPYSASKTSADLFVQAYS
ETYKMPVSITRCSNNYGPYHFPEKLIPLIIKNILEGKPLPVYGDGTNVRDWLYVEDHCKA
IDLVIHKGRAGEVYNVGGHNEKQNIEIVKLTISTIRRLMTEQPEYRQVLKKKEMGADGQI
SIDWINESLITFVKDRLGHDQRYAIDPTKITNELGWTPETSFEIGIVKTIRWYLDNQKWV
EDITGGDYMKYYEQMYGNR
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaagacttatttggttaccggagccgccggttttataggcgcgaactttattaaatat
atgttagcgaaatatctgggaataaagatcgtagtgctggatctgctgacctacgcaggt
aatctcggaacgattgccgaagacatcgacggggagcgttgcgagtttgtaaaaggtgat
atctgcgaccgtgcgttgacggacgggctctttgccaaataccagttcgattatgtcgtt
aattttgcagcggaaagccatgtggaccgcagtatcgaaaatccacagcttttcttggta
acgaatatattaggtactcaaaacctgctcgattccgctcgtaaagcgtgggtgacggga
aaagcggctaccggttatcccgagtggcgcgaaggagtccgcttccaccaagtatctact
gacgaggtgtatggtagtctgggtgctgaaggctatttccatgaaacgactccgttggat
ccgcgcagtccgtatagtgcatccaaaacgagtgccgacctgtttgtacaggcttactcc
gaaacttataagatgccggtcagcatcacccgctgttccaacaattacggtccgtatcac
tttccagaaaagctgataccgttgattattaaaaatatcctcgaaggcaagccgcttccg
gtttatggtgacgggacaaatgtacgtgactggctgtacgtggaagatcactgcaaggct
attgacctggtgattcataagggacgggcaggagaggtctataacgtaggcggccataac
gaaaagcagaatatagagatcgtgaagctgacgatcagcaccatccgccgattaatgacg
gaacaacccgaatatcgccaggttctgaagaaaaaagagatgggtgcggatgggcagatt
tccatcgactggatcaacgaaagcttgattacttttgtaaaagaccgtttgggccatgac
cagcgttatgcgatcgatccgacaaaaatcacaaacgaattaggctggacacccgagact
tctttcgagatcggtattgtcaaaacgatccgctggtatctggataaccagaaatgggta
gaagatatcacagggggagattatatgaaatattacgagcagatgtacgggaaccgttaa
DBGET
integrated database retrieval system