KEGG   Parabacteroides johnsonii: LK449_04840
Entry
LK449_04840       CDS       T07907                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pjo  Parabacteroides johnsonii
Pathway
pjo02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pjo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LK449_04840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pjo03021]
    LK449_04840
Transcription machinery [BR:pjo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LK449_04840
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 HTH_23 HTH_10 KORA HTH_30 HTH_Tnp_ISL3 DUF2774 HTH_20 DUF6930
Other DBs
NCBI-ProteinID: UEA91537
LinkDB
Position
1137122..1137685
AA seq 187 aa
MTEQEIRKYLRRIEEENSQTALRSFYNLCFDRFFRIAYYYLHTEEWAQEVVLDVFLKIWE
RRESLHHIANLEDYFFITIKNASLNYLEKEQRRKDMTADAFDGVSISGESPEDILVSEEL
FAHYVKALDRLPERCREIFIRVREEKQSYAEVAKDLGISVNTVDVQLQKAIGRMRDMLSR
YISGTEN
NT seq 564 nt   +upstreamnt  +downstreamnt
atgacagagcaggagataaggaaatatttaaggcggatcgaagaagagaattcccagact
gctctgcgtagcttttataatctttgcttcgaccgtttctttcgtatagcctactactat
ctgcatacggaagagtgggcacaggaggtcgtcctcgatgtattcctgaaaatatgggaa
cgccgcgagtctttgcaccatatagccaatttggaagattatttctttatcacgataaaa
aatgcctctctgaactatctcgaaaaggaacaacgccggaaagacatgacggcggatgct
tttgacggtgtgtccatctccggtgaatcgccggaagacatcttggtcagtgaggaactt
ttcgcccactatgtcaaggccctcgatcgtctgccggagcgatgtcgtgaaatatttatc
cgtgtacgtgaagaaaagcagtcttatgccgaggtcgcgaaagacttgggcataagtgtc
aatacggtcgatgtacagttacagaaagcgatcgggcggatgcgggatatgttgtcgcgt
tatataagcggaaccgaaaattga

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