Parabacteroides johnsonii: LK449_05045
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Entry
LK449_05045 CDS
T07907
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pjo
Parabacteroides johnsonii
Pathway
pjo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LK449_05045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pjo03021
]
LK449_05045
Transcription machinery [BR:
pjo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LK449_05045
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
GerE
HTH_24
DUF722
DDB_G0268712_C
HTH_40
HTH_28
HTH_Tnp_4
HTH_36
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
UEA91577
LinkDB
All DBs
Position
1200484..1201074
Genome browser
AA seq
196 aa
AA seq
DB search
MGGSGSCDCFSDEYLLALLGKGDEQAFTIIYQRYHKLLYVVAYKYLKNDCSAKDSVQQIF
YRLWESRSVLIINMNLRNYLYTMLKNHLLNEIRNNYMAMEKNYELAQEKVEYEDDLLDNI
EKKEIEEQLYRAINGLPEQKKQVCLYKLRGNLSNLEIANKMGISVPTVKTHYAQAVKMLR
EHFNKLLFMIYSFWLS
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgggaggatctggatcttgtgattgtttttcagatgaatatttgttagccttgttgggc
aagggtgacgagcaggcattcacgattatttatcagcgctatcataaattattgtatgtt
gtggcttataaatatctaaagaatgattgttcggcaaaggattctgtgcaacagattttt
tataggttgtgggagtctcgttctgtattaattataaatatgaatttaaggaattattta
tatactatgctgaaaaatcatttattaaatgagattcgtaataactatatggctatggaa
aaaaactatgaattagctcaggagaaagtggagtatgaagatgatttgttggataatata
gagaaaaaggagatagaggaacaactctaccgggcaataaatggtttgccggaacaaaaa
aagcaggtatgcttgtataagctaagaggtaatttatcgaatttggaaattgccaataaa
atgggaatatcagtcccgactgttaagactcattatgcacaggctgttaaaatgttacgt
gagcattttaataaattattgtttatgatttactcattttggttatcttga
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