KEGG   Parabacteroides johnsonii: LK449_05045
Entry
LK449_05045       CDS       T07907                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pjo  Parabacteroides johnsonii
Pathway
pjo02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pjo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LK449_05045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pjo03021]
    LK449_05045
Transcription machinery [BR:pjo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LK449_05045
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_ECF Sigma70_r4 GerE HTH_24 DUF722 DDB_G0268712_C HTH_40 HTH_28 HTH_Tnp_4 HTH_36 Bac_DnaA
Other DBs
NCBI-ProteinID: UEA91577
LinkDB
Position
1200484..1201074
AA seq 196 aa
MGGSGSCDCFSDEYLLALLGKGDEQAFTIIYQRYHKLLYVVAYKYLKNDCSAKDSVQQIF
YRLWESRSVLIINMNLRNYLYTMLKNHLLNEIRNNYMAMEKNYELAQEKVEYEDDLLDNI
EKKEIEEQLYRAINGLPEQKKQVCLYKLRGNLSNLEIANKMGISVPTVKTHYAQAVKMLR
EHFNKLLFMIYSFWLS
NT seq 591 nt   +upstreamnt  +downstreamnt
atgggaggatctggatcttgtgattgtttttcagatgaatatttgttagccttgttgggc
aagggtgacgagcaggcattcacgattatttatcagcgctatcataaattattgtatgtt
gtggcttataaatatctaaagaatgattgttcggcaaaggattctgtgcaacagattttt
tataggttgtgggagtctcgttctgtattaattataaatatgaatttaaggaattattta
tatactatgctgaaaaatcatttattaaatgagattcgtaataactatatggctatggaa
aaaaactatgaattagctcaggagaaagtggagtatgaagatgatttgttggataatata
gagaaaaaggagatagaggaacaactctaccgggcaataaatggtttgccggaacaaaaa
aagcaggtatgcttgtataagctaagaggtaatttatcgaatttggaaattgccaataaa
atgggaatatcagtcccgactgttaagactcattatgcacaggctgttaaaatgttacgt
gagcattttaataaattattgtttatgatttactcattttggttatcttga

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