Parabacteroides johnsonii: LK449_05670
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Entry
LK449_05670 CDS
T07907
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pjo
Parabacteroides johnsonii
Pathway
pjo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LK449_05670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pjo03021
]
LK449_05670
Transcription machinery [BR:
pjo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LK449_05670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
HTH_23
HTH_40
HTH_VMAP-M9
HTH_10
HTH_20
Stu2_CTS
WHD_HrcA
Motif
Other DBs
NCBI-ProteinID:
UEA91695
LinkDB
All DBs
Position
1380046..1380603
Genome browser
AA seq
185 aa
AA seq
DB search
MSKPISIEGSIQNNFDRIYVTYYSRMLRFAREYVLFEEDAENVVQDVFLLLWEKREVLDI
QISLVSYLFSLVKNRSLDYLRHKVVAEEYKQELTFKLLALEQLNYTFTSEEDIEKVIANA
IDKLPERCREIFLKSRIEGMKYREIADELDISMNTVENQMSIALRKLRIELKDYLPLLLF
LISVK
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacctatttctatcgaaggtagcatacagaataattttgacagaatttatgtc
acatactattcccgtatgctccgttttgccagggaatatgtgttgtttgaggaagatgct
gagaatgttgtccaggatgtgtttcttcttttatgggagaagcgggaagtgctggatata
caaattagcctggtttcctatcttttttcgcttgtgaaaaaccggagccttgattatctt
cgtcataaagtggtggcggaggaatacaagcaggaactgacctttaagttattggccctt
gaacaattgaactatacttttacatctgaagaagatatagagaaagtgatagccaacgct
atcgataaactgcctgaacgttgtcgtgaaatatttttaaaaagccgtatagaaggaatg
aaatatcgggaaattgccgatgaattagatatctcgatgaatacggtggagaaccagatg
tccatagccttaagaaaacttcgtattgaactcaaggactacttgcccctgttgctattc
cttattagtgttaaataa
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