KEGG   Parabacteroides johnsonii: LK449_05670
Entry
LK449_05670       CDS       T07907                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pjo  Parabacteroides johnsonii
Pathway
pjo02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pjo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LK449_05670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pjo03021]
    LK449_05670
Transcription machinery [BR:pjo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LK449_05670
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 GerE Sigma70_ECF HTH_23 HTH_40 HTH_VMAP-M9 HTH_10 HTH_20 Stu2_CTS WHD_HrcA
Other DBs
NCBI-ProteinID: UEA91695
LinkDB
Position
1380046..1380603
AA seq 185 aa
MSKPISIEGSIQNNFDRIYVTYYSRMLRFAREYVLFEEDAENVVQDVFLLLWEKREVLDI
QISLVSYLFSLVKNRSLDYLRHKVVAEEYKQELTFKLLALEQLNYTFTSEEDIEKVIANA
IDKLPERCREIFLKSRIEGMKYREIADELDISMNTVENQMSIALRKLRIELKDYLPLLLF
LISVK
NT seq 558 nt   +upstreamnt  +downstreamnt
atgagcaaacctatttctatcgaaggtagcatacagaataattttgacagaatttatgtc
acatactattcccgtatgctccgttttgccagggaatatgtgttgtttgaggaagatgct
gagaatgttgtccaggatgtgtttcttcttttatgggagaagcgggaagtgctggatata
caaattagcctggtttcctatcttttttcgcttgtgaaaaaccggagccttgattatctt
cgtcataaagtggtggcggaggaatacaagcaggaactgacctttaagttattggccctt
gaacaattgaactatacttttacatctgaagaagatatagagaaagtgatagccaacgct
atcgataaactgcctgaacgttgtcgtgaaatatttttaaaaagccgtatagaaggaatg
aaatatcgggaaattgccgatgaattagatatctcgatgaatacggtggagaaccagatg
tccatagccttaagaaaacttcgtattgaactcaaggactacttgcccctgttgctattc
cttattagtgttaaataa

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