Parabacteroides johnsonii: LK449_07315
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Entry
LK449_07315 CDS
T07907
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
pjo
Parabacteroides johnsonii
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
LK449_07315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
Tex_N
HHH_9
S1
HHH_7
YqgF
T2SSK
S1_RRP5
HHH_6
ATP-synt_ab_C
Motif
Other DBs
NCBI-ProteinID:
UEA92001
LinkDB
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Position
1766899..1769025
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AA seq
708 aa
AA seq
DB search
MVASFHTLISRILSIPAGQVERTIGLLGEGATIPFISRYRKEVTGGLDEVQIGNIKDQLD
KLAELKKRKESILSSIEEQGKLTPELKKRIEDSWDSTEIEDLYLPYKPKRVTKAEIARKK
GLEPLAKVVMMQNERDLSARVSAFVKGEVKNAEEALQGARDIIAEWVNENEEARNAVRNS
FSHTAVITSKVVKGKEEEGAKYRDYFEFSEPLNRTSSHRLLALRRGEAEGILRVSISPDT
AGCLDRLKRRFVKGRGEASDQVSTAVDDSFKRLLKPSIETEFANLSKAKADEEAIRVFAE
NLRQLLLAPPLGQKRVLGVDPGYRTGCKLVCLDAQGALLHNEAIYPHPPQNEKSKAAAKV
AQLVATYAIDAIAIGNGTASRETEQFITNIRYDRKVQVFVVSENGASIYSASKIARDEFP
EYDVTVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVEQGALKKSLDQTVESCVNLV
GVNVNTASKHLLTYISGLGPTLAQNIVDYRTEHGPFQSRRELMKVPRMGEKAFEQSAGFL
RIQDGKNPLDNSAVHPESYPIVELMAKDLKCTVAELISNKDLKKKLDLKKYVTDKVGMPT
LLDIMEELDKPGRDPRQAIQVFSFDPTVKTIEDLKEGQILPGIVTNITNFGCFVDVGIKE
NGLVHISELADRFVSDPTQVVSIHQHVKVKVVSVDLVRKRVGLSMKGI
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggtagcatcatttcatacgctgatttcccgtatcctgagtattcccgccggacaggtg
gaacgaactatcgggctgctgggagaaggagcgacaatccccttcatcagccggtaccgc
aaagaggtaaccggagggctggatgaagtccagatcggcaacatcaaagatcagttggac
aagttggccgaactgaagaagagaaaagaaagtatcttatcctccatagaagaacaaggc
aaactgactcccgaactgaaaaagaggattgaggattcgtgggacagtaccgaaatagaa
gacctctatctcccctacaagcctaaacgggtcaccaaagcagagatcgcccgcaagaaa
gggctcgaacctcttgccaaagttgtgatgatgcagaacgaaagagatttgtcagctcgt
gtgtcagccttcgtcaaaggagaagtgaagaacgcggaagaagcgttgcaaggggcgcgt
gacatcattgccgaatgggtgaatgagaacgaagaggcccgtaacgccgtccggaattct
ttttcacacacggcggttatcacgtccaaagtcgtcaaagggaaagaggaagagggagcc
aagtaccgcgattatttcgaattcagcgaacctttgaaccgaacgagttcacaccgcttg
ttagccctgcgccgaggggaagcggaaggtattttgcgtgtaagcatttctcccgatacg
gcgggttgcctggaccgtctgaaacgccgcttcgtgaaaggacggggagaagcttccgac
caggtatcgacagccgtagacgactctttcaagcgcctgttgaaaccttccatcgaaact
gaatttgctaatctgagcaaggcgaaagccgatgaagaagcgatccgtgtatttgccgag
aacctgcgtcagctgttactggctccacccttggggcagaaacgcgtgttgggggtcgat
cccggttaccgtaccggttgcaagctggtttgcctcgatgcgcagggagcattgttgcat
aacgaagcgatctacccccacccgccccagaacgaaaaaagcaaagcggctgccaaagtg
gcacaactggtagccacatacgctattgatgccatcgctatcgggaatgggacggcaagc
cgtgaaacagaacagttcattaccaatatccgctacgaccgcaaagtacaagtgttcgtg
gtcagcgagaacggagcgtccatctattccgcatccaagatcgcccgcgacgagttcccc
gaatatgacgtgacagtccgtggtgccgtcagtatcggccgccgcctgatggatccgctt
gcagagttggttaagatcgacccgaaaagcattggtgtcgggcaataccagcatgacgtc
gagcagggtgctttgaaaaagagcctcgaccagacggtggaaagctgcgtaaacttagtg
ggggtgaatgtcaatacggcaagcaaacatttgcttacttatatttccggacttggtccg
acgctggcccagaacattgttgattaccgtaccgaacacggccctttccaatcccgccgc
gaactgatgaaagtgcctcgtatgggagaaaaagcttttgaacaaagcgcgggtttcctt
cgcattcaggatggcaagaatccattggacaactcggccgtccatccggaaagttatccg
atcgtcgaactgatggcaaaggacttgaaatgtaccgtcgccgaactgatcagcaataaa
gacctgaagaaaaagcttgacttgaaaaagtatgtcacagataaagtcggaatgccgaca
ttgttggatattatggaagaactggacaagccgggacgtgacccccgccaagccatccag
gtattttctttcgatccgacagtcaaaacgatcgaagacctgaaagaagggcagatcctg
ccgggtatcgtcaccaatataacgaatttcggctgttttgtcgatgtcggcatcaaggag
aacggcctggttcatatttccgaattggcagaccgtttcgtcagcgatccgacacaagta
gtctcgatccatcagcatgtgaaagtaaaagtggtaagcgttgacctcgttcgcaagcgg
gtcgggctttcaatgaaagggatataa
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