Parabacteroides johnsonii: LK449_07525
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Entry
LK449_07525 CDS
T07907
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pjo
Parabacteroides johnsonii
Pathway
pjo03030
DNA replication
pjo03430
Mismatch repair
pjo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LK449_07525 (holA)
03430 Mismatch repair
LK449_07525 (holA)
03440 Homologous recombination
LK449_07525 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pjo03032
]
LK449_07525 (holA)
03400 DNA repair and recombination proteins [BR:
pjo03400
]
LK449_07525 (holA)
Enzymes [BR:
pjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LK449_07525 (holA)
DNA replication proteins [BR:
pjo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LK449_07525 (holA)
DNA repair and recombination proteins [BR:
pjo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LK449_07525 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
UEA92038
LinkDB
All DBs
Position
complement(1810757..1811779)
Genome browser
AA seq
340 aa
AA seq
DB search
MAKKEYTYEEICRDIVAKKFAPVYIMMGDEPFFMDQITDLLLENVLEESERDFNQIIMYG
ADADAASIINAARRFPMMSKYQLVVVREAQLIRDIELLSNYVKNPLMSTVLVVNYKYKNL
DRRKALASATDKTGVLFESKKIPDYKMPAFIASFMQLRSIGIDGKAAQMLSDFLGNDLSR
LSKELDKLALILPEKGVKRITPELVEQNIGISKEYNNFELIKALAMKDVLKANRIAQYFE
KNPKSNPIQMTLPVLFNYFSNLLICYYTKDRSEAGLMAALGLRGTFQVKDYLLGMRNYSA
MKVFNLISEIRMTDARSKGVENTSVSDAELLKELLYKILH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaagaatatacatacgaggaaatatgtcgggatatcgttgcaaaaaaattc
gctcctgtctatataatgatgggtgacgaaccattttttatggatcagataacagacctg
ctactcgaaaatgtattagaagaatccgaacgggattttaaccagattatcatgtacgga
gcagatgcggatgcagcatctataattaacgcagcccgccgtttcccgatgatgtcaaaa
tatcagttagtggttgtccgggaggctcaattaattcgtgatatcgagcttctgtcgaac
tatgttaagaacccattaatgtcaaccgttttggttgtcaattataaatataaaaactta
gatcgccgcaaggcgctggcttctgcgacggacaaaaccggagtgttgttcgagtccaaa
aagattcctgactacaagatgccggcatttatcgcttcgttcatgcaactgcgttcgata
gggatagacggaaaggcggcccagatgctttctgacttccttggaaacgatttaagccgc
ctgagtaaggaattggataagctggcgctgatcctgcctgaaaaaggcgtaaaacgcatc
acgccggaattggtggagcaaaatatcggaatcagtaaagaatacaataactttgaactg
ataaaggcacttgccatgaaagatgtcttgaaggcgaaccgtattgctcaatacttcgag
aagaacccgaaaagcaatccgattcagatgacccttcctgtattatttaactatttctcg
aacctcctgatttgttattatacgaaggatcgttccgaagccggcttgatggcggcactc
ggacttagaggaacatttcaggtgaaggattatcttttagggatgcgaaactactcggcg
atgaaagtgttcaacctgatcagtgagatccgtatgacggatgcccgttcgaaaggagtg
gaaaatacttctgtttccgatgccgaacttttaaaggaattgctctataaaatcctgcat
tga
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