Parabacteroides johnsonii: LK449_07900
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Entry
LK449_07900 CDS
T07907
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pjo
Parabacteroides johnsonii
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pjo03009
]
LK449_07900 (rimO)
Enzymes [BR:
pjo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LK449_07900 (rimO)
Ribosome biogenesis [BR:
pjo03009
]
Prokaryotic type
ribosomal protein modification factors
LK449_07900 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
RIM2a_ZnF
Motif
Other DBs
NCBI-ProteinID:
UEA92105
LinkDB
All DBs
Position
complement(1904304..1905599)
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AA seq
431 aa
AA seq
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MRKNKVDIITLGCSKNLVDSEQLMRQFVANGYTVEHDPHKINGEIVVVNTCGFIGDAQEE
SINMILDLGEAKKKGKIGKLFVMGCLSERFLKDLENELPEVDRFYGKFNWKELLNDLGKS
YHRELAADRVLTTPRHYAYLKIAEGCDRTCSYCAIPISTGRYQSIPMEEIEKEVRLLVKQ
GVKEFQVIAQDLTYYGLDLYKRHALPELVERISDIPGVEWIRLHYGYPSHFPYDLLRVMR
ERDNVCKYMDIALQHISDPMLKKMRRNITKEETYALIRRMREEVPGIHLRTTLMVGHPGE
TEQDFEELVEFVKEARFERMGAFAYSHEEGTYSFKHYTDDIDPDVKQDRLDYLMRIQEGI
SAEVNGSKIGKEFKVMIDREEDDFYVGRTEFDSPEVDPEILVSKEKPLIPGTFYNVRIDD
AQAFDLYGSVL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaaataaggtagatattataacactgggatgttcaaagaacctggtggattcg
gagcagcttatgcgccagttcgtagcgaacggatataccgtcgaacatgacccccataag
attaacggtgaaatcgttgttgtgaatacctgcggtttcatcggagatgcccaggaagag
tcgattaatatgatactcgatctgggagaggccaagaagaaagggaagatcggtaaattg
tttgtcatgggatgtctttccgaacggttcctgaaagacttggaaaatgagttaccggaa
gtcgatcgtttctatggaaagttcaattggaaagaactgttgaacgatttgggtaaatcc
taccaccgggaattggctgccgaccgtgttttgacgactccccggcactatgcctacctg
aagatcgccgaagggtgtgaccgcacctgttcgtattgcgccattccgatcagtacgggg
cgttaccagtccataccgatggaagaaatcgagaaagaagtccgcctgttggtgaaacag
ggtgtgaaagaatttcaggtgatcgcccaggatttgacctattatggtttggatctgtat
aaacgccatgcgttgccggaactggtggagcgcatctccgatattccgggagtggaatgg
attcgcttgcattatggctatccgtcccatttcccttatgatttgctcagggtgatgcgc
gaacgcgataatgtctgcaaatatatggatatcgcccttcaacatatcagtgacccgatg
ttgaagaaaatgcgccgtaacatcacgaaagaagaaacgtatgccttgatacgccggatg
cgggaggaagttcccggcatccatctgcgtacaaccttgatggtcggccatccgggggaa
accgagcaggattttgaagagctggtcgagttcgtaaaggaagcccgcttcgaacgtatg
ggcgcctttgcttacagccatgaggaaggaacctattcgtttaaacattataccgatgat
atcgatccggacgtcaaacaagaccggttggactatctgatgcgcatacaggaaggtatt
tcggccgaagtgaacggctccaagatcggaaaggaattcaaggtgatgatcgatcgggag
gaagacgacttctatgtcggccgtacggaattcgattcaccggaggtcgatccggagatt
cttgtttctaaagagaagccgttgatccccggaacgttttataacgtacggattgacgat
gcgcaggctttcgacctgtatggaagcgtactttaa
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