KEGG   Parabacteroides johnsonii: LK449_08235
Entry
LK449_08235       CDS       T07907                                 
Name
(GenBank) type I restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pjo  Parabacteroides johnsonii
Brite
KEGG Orthology (KO) [BR:pjo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pjo02048]
    LK449_08235
Enzymes [BR:pjo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LK449_08235
Prokaryotic defense system [BR:pjo02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LK449_08235
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 ResIII HSDR_N DEAD SNF2-rel_dom DUF3837 Hairy_orange
Other DBs
NCBI-ProteinID: UEA92168
LinkDB
Position
complement(1983855..1986830)
AA seq 991 aa
MISKEKQIEDHFINKLIDLKYTYRDDIRDRNSLERNFRTKFETLNRVHLTDSEFSRLLEE
IIDADVFASSKRLRGINTFMREDGTPLQYMLVNIKDWCKNDYEVINQLRINTNNSYHRYD
VILLINGIPVVQVELKASDVSPRRAMQQIVDYKSDTGNGYTNTLLCFMQLFIVSNQANTY
YFTNNNDQYFSFNTDEQFLPVYQYATESNRKITHLDAFSTAFLSKCTLGEMINRYMVLVV
SEQKLLIMRPYQIYAVKAIIDCIHQNRGNGYIWHTTGSGKTLTSFKASTLLKDNPDIDKC
LFVVDRKDLDRQTREEFNKFQENCVEENTNTGTLVRRMLSDDYADKVIVTTIQKLSVALD
SSNKNNYKDRLIHLKDKRIVFIFDECHRSQFGYNHKAIKEFFPNAQLFGFTGTPIFEQNA
TYTKISGEQASYKITEDIFPSRLHAYTITHAIEDKNVLRFHVDYFKPKETGDRRADGTLK
KQAVVDAILSKHDAATHSRRFNAILATASINEAIEYYELFRSAQESLKQQDENYEPLNIA
CVFSPPAEGNKDIQQIQEDLPQEQDDNREEPEEKKKALKTIIDDYNRQYKTNHTIAEFDA
YYQDVQKRIKDQQYSNKDYPHKNKIDITIVVDMLLTGFDSKYLNTLYVDKNLKYHGLIQA
FSRTNRILNDTKPYGNILDFRGQQDAVDEAIALFSGEKTDNPKEIWLVDSAPKVIEKFQD
AVRKLSEYMQSQELECRAEDVYNLQGDEARAGFINCFKEVQRYKTQLEQYTDIDEQERAK
IEELFSEEALRSFRGAYLETAQQLRKLREKGKGQEVSQQVEDLDFEFVLFASAVIDYDYI
MGLIARYTNSRNSKQRVTKEQLISLVASSANLIDERDDIREYIDSLDEVNGKTEQEIKEG
YETFKAEKYAKQLASIADKHGITADSLREFVEQIMERMIFDGEKLSDLLAPLELGWKARI
KAELALMDDLIPLLKRLAAGREISGLSAYED
NT seq 2976 nt   +upstreamnt  +downstreamnt
atgatatctaaggaaaaacaaatagaagatcattttattaataaattaatagatttaaaa
tatacctatcgtgacgatatccgtgataggaattcattagagaggaattttagaacaaag
ttcgaaacattgaacagagttcatttgaccgattctgaatttagtcgtctacttgaagag
atcattgacgctgatgtttttgcttcttctaaaaggctgcgaggaatcaatacgtttatg
cgtgaagacgggacgccgttacaatatatgctggtcaatatcaaagattggtgtaagaat
gattatgaggtgataaatcagttgcgtataaataccaataacagctatcatcggtatgac
gtgattttattgatcaatggcattcctgtagttcaggtagagttgaaggcttcggatgta
agtcctcgccgggcaatgcaacaaattgttgattataaaagtgatacgggtaacggttac
acgaacacattactctgttttatgcaactttttatcgtaagcaatcaggcaaatacttac
tatttcaccaataataacgatcaatatttcagtttcaatacagatgagcagtttttgcca
gtctatcaatatgcgacagagtcaaacagaaaaataacacaccttgatgcgttttctacg
gcatttttgtcgaaatgtacattgggggagatgattaaccgctatatggttttggttgtc
agtgaacaaaagttgctcataatgcgtccctatcagatatatgcggtaaaagcaatcata
gattgtattcatcaaaacagaggtaacggttatatttggcacacgacaggaagtggcaag
acgcttacatcattcaaagcatctactctgctaaaagataatcccgacattgataaatgc
ttgtttgtggtagatcgtaaagatttggatagacaaacccgtgaggagtttaataaattt
caggaaaattgcgtagaagagaataccaatacagggactcttgttagacgcatgttgtcg
gacgactatgccgacaaagtgattgtaactaccattcaaaaattgagtgtcgctctcgat
tcgtccaataaaaacaactataaggaccgtttaatccatctaaaggataaacgtattgta
tttattttcgatgaatgtcaccgttcccagttcggatacaatcacaaggcaatcaaagag
ttctttccgaacgcccaactcttcggcttcaccggaacacctatatttgaacagaatgca
acctatacaaaaataagcggagagcaagcctcgtacaagatcacggaagatattttccca
agccggctgcacgcctataccataacacatgctatcgaggacaaaaacgtcttacgtttc
catgtcgattactttaagcccaaagagacaggtgaccgccgggcagatggtacgctcaag
aagcaagcggtggtagatgcgatattatcgaaacatgatgctgccacccattcccgtagg
tttaatgccatacttgccacagcttctatcaatgaagctatcgagtattacgaactgttc
cgcagcgcacaagaaagcctaaagcaacaggatgaaaattacgaaccgcttaacatcgct
tgtgtattctcgcctcctgccgaaggaaataaagatattcagcaaatacaggaagatctg
ccgcaagagcaggatgataaccgtgaagagcctgaagaaaagaaaaaggcgttgaagacg
attattgacgactataaccggcagtataagaccaaccatacgattgcagagtttgatgcc
tactatcaggatgtgcagaaacgcatcaaagatcaacaatatagcaataaagactatcca
cataagaataagatcgatataacgattgtcgtggatatgttgctgacaggctttgactcc
aagtatctcaatactttgtatgtggataagaatttgaagtatcacggtttgatacaggcg
ttctcacgtaccaatcgtattctgaacgatactaagccgtacggtaatattctggatttc
agaggtcagcaagatgccgtcgatgaagcgatcgcattattctccggggaaaagaccgat
aatccgaaagagatatggcttgtggattccgctccgaaagtgatcgagaagtttcaggat
gccgttcggaagttgagtgaatatatgcaatcgcaggaattggaatgccgggcagaggat
gtttataatctgcaaggcgatgaagcccgtgccggctttatcaattgtttcaaagaggta
caacgatacaagactcagttggaacaatatacggatattgacgagcaggagagagcgaaa
atagaagaactgttttcggaagaggctttgcgctcgttccgtggggcttatcttgaaaca
gcacagcaattacgcaaactgcgggagaaaggtaaaggtcaagaggtcagccaacaggtt
gaagaccttgattttgaatttgtgctttttgcttcagctgtcatcgactacgattatata
atgggattgatcgcccgctacacaaatagcagaaacagcaaacaacgagtaaccaaagag
cagttgatcagtcttgtggcatcgagcgccaacctgattgatgaacgagacgatattcgg
gaatatatcgatagtctcgacgaagtgaacggtaagacggaacaagagataaaagagggg
tacgaaacatttaaggcggagaaatatgctaaacaattggcatccattgccgacaaacac
ggtatcacagcagattcgttgcgcgaatttgttgaacagataatggaacgaatgatcttc
gatggtgaaaaactgagtgatttgttagctccgttggaattaggatggaaagcgcgtatc
aaggccgaattagccctgatggatgatctcattccattattgaaacgtttggctgctggc
cgtgaaatttcaggattgtctgcttatgaagattga

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