Parabacteroides johnsonii: LK449_08715
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Entry
LK449_08715 CDS
T07907
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pjo
Parabacteroides johnsonii
Pathway
pjo00220
Arginine biosynthesis
pjo00240
Pyrimidine metabolism
pjo00250
Alanine, aspartate and glutamate metabolism
pjo01100
Metabolic pathways
pjo01110
Biosynthesis of secondary metabolites
pjo01240
Biosynthesis of cofactors
Module
pjo_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LK449_08715 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LK449_08715 (carB)
00220 Arginine biosynthesis
LK449_08715 (carB)
Enzymes [BR:
pjo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LK449_08715 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
RimK
GARS_A
ATP-grasp_3
GSH-S_ATP
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
UEA92259
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Position
complement(2120824..2124054)
Genome browser
AA seq
1076 aa
AA seq
DB search
MKEDIKKVLVLGSGALKIGEAGEFDYSGSQALKAIKEEGIQTVLINPNIATVQTSEGVAD
TVYFLPVTPFFVEKVIAKERPDGILLAFGGQTALNCGVALYQSGVLEKYNVRVLGTPVQA
IMDTEDRELFVRKLDEIGVKTIKSEAVENAEDARRAAAGLGYPVIVRAAYALGGLGSGFC
DNEEELDVLVEKAFSFSPQVLVEKSLKGWKEVEYEVVRDRFDNCITVCNMENFDPLGIHT
GESIVIAPSQTLTNSEYHKLRELAIRIIRHIGIVGECNVQYAFDPESEDYRVIEVNARLS
RSSALASKATGYPLAFVAAKLGLGYGLFDLKNSVTKTTSAFFEPALDYVVCKIPRWDLGK
FHGVARELGSSMKSVGEVMAIGRTFEEAIQKGLRMIGQSMHGFVENKELVIADIDKALHE
PTDTRIFVISKAFRAGYTVDQIHELTKIDKWFLQKLYGIMQTDKELRAFDMKGIKRWRLN
PELVRKAKVQGFSDFQIARALGLEGDIEKGMMQVRQFRKEHGIVPVVKQIDTLAAEYPAQ
TNYLYLTYSGTENDVQYLGDHRSIVVLGSGAYRIGSSVEFDWCGVQALETIRKEGWRSVM
INYNPETVSTDYDMCDRLYFDELTFERVMDILELENPHGVIVSTGGQIPNNLAMRLDEQH
VNILGTSAKSIDNAEDREKFSAMLDRIGVDQPRWKELSSMEDINEFVAEVGFPVLVRPSY
VLSGAAMNVCSNQEELERFLQLAANVSKKHPVVVSQFIEHAKEVEMDAVADKGEIVMYAI
SEHIEFAGVHSGDATIQFPAQKLYVETVRRIKRISKQIAKELNISGPFNIQFLAKGNEIK
VIECNLRASRSFPFVSKVLKINFIELATRIMLGLPVEKPNKNEFDLDYVGIKASQFSFNR
LQKADPVLGVDMASTGEVGCIGDDVSETILKSMLSVGLRIPEKNILLSTGTPKQKVAMLD
AAKMLVAKGYNLFATGGTYRFLEENGISSTQVYWPSEEGKEPQALTMLHERKIDMVVNIP
RDLSAGELDNGYKIRRAAIDLNVPLITNARLASAFIEAFCTLGIDDIQIRSWQEYK
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagatataaagaaagtcctggtactcggttccggcgccctaaagatcggcgaa
gcgggagaattcgactattcaggcagccaggctttaaaagctattaaggaggagggaatc
cagacagtgcttatcaatccgaatatcgccacggtacagacttcggaaggagtggcagat
actgtttatttcctgcctgtcactccctttttcgtcgaaaaggtgattgctaaggaacgt
ccggatggtatcctgctcgcttttggcggccagacggcattgaactgcggtgtggcgctt
taccagagtggagtgctggaaaaatataacgtccgtgtgctcggtactccggtacaagcg
atcatggatacggaagaccgtgaactctttgtccgtaaactcgatgagatcggtgtgaag
acgatcaagagcgaagcggtggagaatgccgaagatgcccgccgggctgctgccgggttg
ggctatccggtgattgtccgcgctgcttatgcattgggcggcctcggttccggcttctgc
gacaatgaggaagaactggacgtgttggtcgaaaaagccttctctttctctccccaggtg
ttggtggaaaagagcttgaaggggtggaaagaagtggaatatgaagtggtgcgggatcgt
ttcgacaactgcatcacggtctgtaatatggagaacttcgatccgttgggcatccatacc
ggcgaaagtattgtcattgctccgtcacaaacactgaccaacagcgagtatcataaactt
cgcgaactggctatccggatcatccgtcatatcggtatcgtgggggaatgcaacgtgcaa
tatgctttcgatcctgagagcgaagattatcgtgtgatcgaagtgaacgcccgtctctct
cgttcatctgcgctggcctccaaggcaaccggctatccattggcgttcgtcgctgccaag
ttgggattagggtatggccttttcgatttgaaaaattcagtgacgaagacgacaagcgct
ttcttcgaaccggctctcgattatgtggtctgcaagatcccgcgttgggacttgggcaag
ttccacggtgtggcacgcgaattggggtcgagcatgaaatcggtgggcgaggtgatggcg
attggtcgtaccttcgaagaggcgattcagaagggtctgcgtatgatcggacagagcatg
cacggcttcgtggaaaacaaggagctggtgatcgccgacatcgacaaggcgctccatgaa
ccgaccgatacccgcatctttgttatctcgaaagcattccgtgccggatataccgtcgac
cagatacatgaattgacgaagatcgacaagtggttcctgcaaaaactttacggaatcatg
cagaccgataaggaactgcgcgccttcgatatgaaaggcatcaagcgttggcgtttgaac
ccggaactcgttcgcaaggcgaaagtgcagggcttctccgatttccagatcgcccgtgcc
ctcggccttgaaggggatatagaaaaaggcatgatgcaggtacgccagttccgtaaggag
cacggtatcgtcccggtcgtgaagcagatcgatacgttggccgccgaatatccggcgcag
acgaactatctgtatctgacctatagtggtacggaaaacgatgtgcagtatctgggcgac
catcgctccatcgtcgtgctgggttccggcgcttaccggatcggcagctcggtcgagttc
gactggtgcggcgtgcaggcgttggaaacgatccgtaaggagggctggcgttcggtgatg
atcaactacaaccccgaaacggtttcgaccgactatgatatgtgcgaccgcctttacttc
gacgaactgaccttcgagcgtgtgatggatatcctcgaactggaaaatccgcacggcgtg
attgtctcgacaggcggccagatcccgaataacttggcgatgcgcctcgacgagcagcat
gtcaatatcttagggacatccgccaagagcatcgacaatgccgaggaccgcgagaagttc
tccgccatgctggaccgtatcggagtggatcaaccgcgctggaaagaactttcgtcgatg
gaggatatcaacgagtttgtggccgaggtgggttttccggtcttggttcgtccgagttat
gtgttgagcggtgccgccatgaatgtctgctctaaccaagaggaactcgaacgcttcctg
cagctggcggccaacgtttcgaagaagcatccggtcgttgtcagccagttcattgaacat
gccaaggaggtggaaatggatgcggtggccgataagggtgagatcgtcatgtatgcgatc
tccgaacatatcgagtttgctggtgtgcattccggcgatgcgactatccagtttcccgca
caaaagctgtatgtcgaaacggtccgtcggatcaagcgtatcagtaagcagatcgcgaag
gaactgaatatctccggcccgttcaatatccagttcctggcgaaaggcaacgagatcaag
gtgatcgaatgtaaccttcgcgcgagccgttctttccccttcgttagtaaagtattgaag
attaactttatcgaactggctacccgtatcatgttgggcttgcctgtcgagaaaccgaat
aaaaacgagtttgacctggattatgtaggtatcaaagcttcccagttctcttttaaccgc
ttgcagaaagccgatcccgtcctgggagttgatatggcttcgacgggtgaggtcggctgt
atcggtgacgatgtttccgagacaatcctgaagagtatgctctctgtcggtctccgcatt
cctgaaaagaatattttgctctcgacggggacaccgaaacagaaagtggctatgctggat
gccgccaagatgctggttgcaaaaggctataatctctttgccacaggcgggacgtatcgt
ttccttgaagagaatggtatctccagcacgcaggtttactggccgagcgaggagggcaaa
gaaccgcaagcactcactatgctccacgaaaggaaaatcgacatggttgtgaatattccg
cgcgatctttccgccggagaattggacaatggctacaagatccgccgtgccgctatcgac
ttgaacgttccgctcatcacgaatgcccgtctggcaagcgcctttattgaagctttctgt
accttgggcatagatgatattcagatacggagttggcaagagtataaatga
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