KEGG   Parabacteroides johnsonii: LK449_09485
Entry
LK449_09485       CDS       T07907                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pjo  Parabacteroides johnsonii
Pathway
pjo02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pjo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LK449_09485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pjo03021]
    LK449_09485
Transcription machinery [BR:pjo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LK449_09485
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF GerE HTH_Tnp_ISL3 HTH_38 HTH_23 HTH_28 DUF722 PF0610-like_N SWIRM HTH_11
Other DBs
NCBI-ProteinID: UEA92402
LinkDB
Position
complement(2320570..2321112)
AA seq 180 aa
MEERELILLLKQSSKDAFTALYKQYWKQVYNFSRLYLTRADAAEEVVQEVFIKVWETREF
LREDDHFKGLLFIITRNLIFNRHRKNVNEDFYKVTVLAALEEPYDVEEEIDAHNLQEYID
RLIDELPPRRREIFNLSRKEQKSYKEIALLLNISEKTVENQIGEALKYLKKNITLLLLFI
NT seq 543 nt   +upstreamnt  +downstreamnt
atggaagaacgggaactgatactactattgaaacagagcagcaaagacgcgtttactgct
ctgtataagcaatactggaaacaggtctataatttcagtcgcctttatttaacccgtgcc
gatgctgccgaagaagtcgtgcaggaggtcttcatcaaagtatgggaaacgcgtgaattt
cttcgtgaagatgaccattttaaaggcttgctgtttattatcacccggaatctgatcttt
aaccggcatcgcaagaatgtgaatgaagatttctacaaagtcacggtccttgctgcattg
gaagaaccgtatgacgtagaagaagagattgatgcccacaaccttcaggaatacatagac
cgcctgattgacgaactgccgccacgccgccgtgagatttttaacttgagccgaaaggaa
caaaagagctacaaagaaatagctctcctgttgaatatttcagagaaaacagtcgaaaat
caaatcggcgaagccctcaagtacttaaagaaaaatataacattgcttcttctctttatc
tga

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