Parabacteroides johnsonii: LK449_09485
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Entry
LK449_09485 CDS
T07907
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pjo
Parabacteroides johnsonii
Pathway
pjo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LK449_09485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pjo03021
]
LK449_09485
Transcription machinery [BR:
pjo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LK449_09485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_Tnp_ISL3
HTH_38
HTH_23
HTH_28
DUF722
PF0610-like_N
SWIRM
HTH_11
Motif
Other DBs
NCBI-ProteinID:
UEA92402
LinkDB
All DBs
Position
complement(2320570..2321112)
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AA seq
180 aa
AA seq
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MEERELILLLKQSSKDAFTALYKQYWKQVYNFSRLYLTRADAAEEVVQEVFIKVWETREF
LREDDHFKGLLFIITRNLIFNRHRKNVNEDFYKVTVLAALEEPYDVEEEIDAHNLQEYID
RLIDELPPRRREIFNLSRKEQKSYKEIALLLNISEKTVENQIGEALKYLKKNITLLLLFI
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacgggaactgatactactattgaaacagagcagcaaagacgcgtttactgct
ctgtataagcaatactggaaacaggtctataatttcagtcgcctttatttaacccgtgcc
gatgctgccgaagaagtcgtgcaggaggtcttcatcaaagtatgggaaacgcgtgaattt
cttcgtgaagatgaccattttaaaggcttgctgtttattatcacccggaatctgatcttt
aaccggcatcgcaagaatgtgaatgaagatttctacaaagtcacggtccttgctgcattg
gaagaaccgtatgacgtagaagaagagattgatgcccacaaccttcaggaatacatagac
cgcctgattgacgaactgccgccacgccgccgtgagatttttaacttgagccgaaaggaa
caaaagagctacaaagaaatagctctcctgttgaatatttcagagaaaacagtcgaaaat
caaatcggcgaagccctcaagtacttaaagaaaaatataacattgcttcttctctttatc
tga
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integrated database retrieval system