Parabacteroides johnsonii: LK449_09730
Help
Entry
LK449_09730 CDS
T07907
Name
(GenBank) response regulator
Organism
pjo
Parabacteroides johnsonii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reg_prop
Response_reg
HATPase_c
HTH_18
Y_Y_Y
HTH_AraC
HisKA
DUF5074
SGL
RcsD_ABL
DUF2098
Agro_virD5
Motif
Other DBs
NCBI-ProteinID:
UEA92445
LinkDB
All DBs
Position
2379847..2383836
Genome browser
AA seq
1329 aa
AA seq
DB search
MLYATPAYSINFFFSHLGVEDGLSQVSVLDIFQDSDGYIWFGTRNGANRYDGYEFVIYQN
EVNNNATLTDNYIRGFAEDDRKNIWIATSNGINCIDHTTKKIIRFYPKSIDKECTTNAAV
RLLKHSDGNVYAFCNQSIFKCSMDQTVEPILPDTVISSPAHSVAQAPDEDIYIGTESSGL
YIYSGNWKLKQHIPVDGTITAILPDEGGNIWLGLDEAGICLFNKERQTFTWLHKDNTCLS
NNSIRTLVPYSDSSILIGTFRGLNILDKKELAIAPADINIAGKGGLSHYSIHSMMIDKDQ
TLWIGTYSAGVNYHSPFYRPVSYITPNEYAGIIGKGQQDKNGNMWFATEGAGLFYYNPES
GRQQLYPIKPLHEGNYEINIIKSILIQGDSILCSTHFGSVYLFSIRDKQYKKLYDFRHND
IFSLYIDKKGRLWIPTNSSQDLVMVDRGKQVNRFMADGVSRPFRWVTVIHELEPDLFLFG
TLSDSLYLYDIKKETVRNLSTELQPNPKFEKLGNITAITQDNEGNVWIATNKNGLYRLNR
NLKLAKHYQKEDGLSDSYINSLTIDRHQNIWVTTGKSLYKLNRTTDIFNEMKIADIPAME
FTRFSGNSISDDGSIYFPGDKGILFFNPDKIMVNPNIPPVYITSLIVNNKDDVTGEIEDG
GITLASDQNSITFRYTALNFIHSERNQYAYKLEGADPTWHTVGNRREAYYSNLAPGTYTF
RIKASNNDNVWNSEEATLRITIDPPFYKTWWAYLLYFSIITFIIVKIIRHQHDKHERERE
LRYKQMEQDKVNELHEERMRMFTNFSHELRTPLTLIINPLNDLMQYVSFSPEIKETLQLI
KKNTGRMLLLVNNLMDIQKYEAGKTILQKTSFNFSAFIREMYHSFESVAGNREIRFTLDN
ELPETYQVCFDEAEIEKIFFNLLSNAFKFTPSEGQVTIRVSTITQAECELLPHFPAQYSS
ILVEARYLFIEVADTGKGFSEQEAEKIFEPFYRSQEDIHRQISGTGIGLSLTRSIILQHN
GCIWTESSEAEGTRFLFLLPDTEKQEEGQDESPVLSKSAEISKKFDLLVEETRNKNKQTI
LLADDNQEVLQYLEQQLCLDYVVVKAFNGKEALAMIEESYPHIVISDVMMPEMNGLELCK
RIKENQNYCHIPVILLTAKSMISQIEEGLDAGADDYIVKPFQISLLKARIRNILSLREKM
KTMYGETLSLKQFGVEEPKEHDDFLARYIEIVKANISNPELDVSVIYEALGMSRTNFYRK
VKTVTGLSPIELIKNIRLEAGAKLLKESDMNVSEIAQHIGFSSRSYFARSFKAVYGMSPT
EYQETESQN
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgctatatgcaaccccggcatatagcataaatttcttcttctcccacctgggagtagaa
gatggcctgtcgcaagtttccgttcttgatattttccaagattcggacggctacatctgg
ttcgggacacgcaacggagcaaaccgctatgacgggtatgaatttgtcatctatcagaat
gaggtaaacaacaacgccacattgaccgacaactatatccggggatttgctgaagacgac
cggaagaatatctggatcgcaacttcaaacgggatcaactgcatcgatcatacaaccaaa
aagataatccgtttctaccccaaaagcatcgacaaagaatgcaccaccaacgccgcagta
cgactattgaagcattccgacggaaatgtctatgctttctgcaaccagtccatattcaaa
tgcagcatggaccagacagtcgaaccgatcttgcccgacacggtaatctcttcaccggcc
cactccgtagcacaagctccggacgaggacatctatatcggaacggagagcagcggcttg
tacatctattccggaaactggaaactaaaacaacatataccagtcgacggtaccataaca
gccatactgccggacgagggcggaaacatatggctggggctggacgaagccggaatctgc
cttttcaacaaagagaggcagacttttacctggttgcacaaagacaacacctgcctcagc
aacaactcgatacgcacactcgtcccctatagcgacagttccattctgatcggaacgttc
cggggtttgaacatactggataaaaaagagcttgccatcgctccggcagatatcaatatc
gccgggaaaggaggactgagtcattactccatccatagcatgatgatcgacaaagaccag
acactttggatcgggacctattcggcgggagtcaactatcacagtcccttttacaggccg
gtttcctatatcacgccaaacgaatatgccggtatcatcggcaaaggccaacaagacaag
aacggaaacatgtggtttgcaacagaaggtgccggattgttttactataacccggaaagc
gggcggcaacagctttatcccatcaaacctcttcacgaagggaattacgagatcaatatc
ataaaatcgatcctgatacagggagactcgattttgtgttccacgcatttcggatcggtc
tatttgttctctatccgtgacaaacagtataaaaagctgtacgacttccggcacaacgac
attttctccctatacatcgacaaaaaaggacggctctggataccgacaaacagcagccag
gacttggtgatggtcgacagggggaagcaggtcaatcggttcatggccgatggtgtttcc
cgtcctttcagatgggtcaccgtgatccatgaactcgaaccagacctgtttttgttcggc
acattgtccgacagcctttacctgtacgacatcaagaaagaaaccgtccgcaatctttcc
accgaactgcaaccgaatcctaagttcgagaagttggggaatatcacggccattacgcag
gacaacgaaggcaacgtctggattgcgaccaataaaaacggcttataccgcctgaaccgg
aacctgaaactggccaaacattatcagaaagaggacgggctgtccgacagttacattaac
tcgctgactatcgaccgacatcaaaatatctgggtgacgacgggaaaatctctgtacaaa
ctgaatcgtacgaccgatattttcaacgaaatgaagatagccgatattcctgcaatggag
tttacacgattttcaggcaacagcatttctgacgacggcagcatctattttcctggagac
aaaggaatccttttcttcaatccggacaagatcatggtgaaccccaacattccacccgta
tatatcacttccctgattgtaaataacaaagacgacgtgacgggagagattgaggacgga
ggcattacgcttgcttccgaccagaatagcatcacgttcagatacacggcgttaaacttt
atccattccgaacggaaccagtatgcctacaagttggaaggagccgacccgacgtggcac
acggtcggcaaccggcgggaagcctattacagcaatttggcccccggcacttacacgttc
cggatcaaagcctccaacaacgacaacgtatggaactccgaagaagcgacactacgcatc
acgatcgatccgcccttttacaagacttggtgggcttatctcctatacttcagtatcatc
acattcatcattgtgaaaatcatccgccaccaacacgacaagcatgaacgggaacgggaa
cttcgctacaaacagatggagcaggataaggtcaacgagctgcatgaggaacgaatgcgc
atgttcaccaatttctcacacgaactgcgtactcccctgacgctcatcatcaacccgcta
aacgacctgatgcagtacgtctcgttctcgcccgaaataaaggagacacttcagctgatc
aaaaagaacaccggacggatgttactcttagtcaacaacctgatggatatacaaaaatac
gaggccggtaaaacgatcctgcaaaagaccagtttcaacttctccgcctttatccgcgag
atgtatcactccttcgagagtgtggcgggcaacagggaaatccgtttcacgttggacaac
gagctgccggaaacctaccaggtttgtttcgatgaggcggaaatcgaaaagatattcttc
aatttgctctccaatgccttcaaattcacaccttcagaaggacaggtgaccatccgtgtc
agtacgatcacacaagcagaatgcgaactgctcccccatttcccggctcaatacagctcc
attctggtagaagccagatacttgtttatcgaagtggccgacactggtaaaggattcagc
gaacaggaagcggaaaagattttcgaacctttctaccgttcgcaagaagatatacaccgg
cagatttccggtacaggcatcgggcttagcctgacacgctccatcattttgcagcataac
ggttgcatctggaccgaaagctcggaagcggaaggcactcgtttcctcttccttcttccc
gacaccgagaagcaggaagaagggcaagacgaatctcccgtcctgtccaaatctgctgaa
atcagcaaaaagttcgatttgctggtcgaagagactcggaacaaaaacaagcagaccatc
ttgctggccgacgacaaccaggaagtgcttcaatatctggaacaacaactctgcctggac
tatgtcgtggtcaaggcattcaatggcaaagaggcattggcgatgatcgaggaatcatat
cctcatatcgtcatcagcgacgtcatgatgcccgaaatgaacgggctcgaactttgcaaa
cgtatcaaagaaaaccaaaactattgccatataccggttatcctacttaccgccaaatcg
atgatatcacaaatcgaagaaggcctggatgccggcgcagacgactatatcgtcaaaccg
ttccagatatctttgctcaaagcccgcatccggaacatcctttccctgcgcgagaaaatg
aagacgatgtacggggaaacgctttccctcaaacagttcggagttgaagagccgaaagag
cacgacgatttcctcgcccgatatatcgagattgtaaaagccaatatatcgaatcccgaa
ctcgacgtgtcggtcatttatgaagcattgggaatgagccggactaacttttacaggaaa
gtaaagacggtaaccgggctttctcctatcgaactgatcaaaaacatccgcctggaggct
ggggcgaaattactaaaggaatcggacatgaacgtttccgaaatagcccagcacatcggt
ttcagtagccgttcgtattttgcccgcagtttcaaggctgtctatggaatgtcgccgaca
gaatatcaggaaacagaatctcaaaactaa
DBGET
integrated database retrieval system
