Parabacteroides johnsonii: LK449_09755
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Entry
LK449_09755 CDS
T07907
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pjo
Parabacteroides johnsonii
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pjo03400
]
LK449_09755
DNA repair and recombination proteins [BR:
pjo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LK449_09755
Archaeal homologous recombinant proteins
LK449_09755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
GTP_EFTU
SLATT_6
RsgA_GTPase
AAA_22
cobW
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UEA88856
LinkDB
All DBs
Position
complement(2393527..2396487)
Genome browser
AA seq
986 aa
AA seq
DB search
MKILAIRGRNLASLEGDFEIDFTVEPLLSAGIFAISGPTGAGKSTLLDAMCLALFARTPR
TDQAKENNVKLQDVSNEQLSQSDPRFLLRRGTASGFAEVDFMALNGHRYRTRWSVARARD
KENGRLQNPRLALYNLDKEEEEQGTRSDLQARIIELIGLTFEQFTRSVLLAQNDFSTFLK
AEQGEKASLLEKLTGTELYSAISRQIFERNARAKDAFDLIQSRIQGIELLTDEEENDLRT
RLAQAEKESQRIEKAKAEQQALQEAVRSVEQQISVRRRQQKEAADKLVHATELLLVARRE
YEKGVEEQQQSEARFKSLQQEILQARKLDIQLDTAIRDLSHSEQQLKNVTLRKEDAEKKY
QAAVLRQKQGAEEMVRLAAWRERYKKKERIAEQLSALLLHLDAASVARSGMEAATRSIET
LQQEVVALNKQLAALQQANANKQQALKRAEEEYRNLEEELKAVDAPALDKQIEKLRQERE
QLLIEQARLEASGNIKDLRGRLQEGQPCPVCGSTHHPFAHQAPVAPVSALTLQLQALSDK
KETYIAHTRHLARLQQQLLQLHKELADSEAACKEMIGKQQLAASRQEREEVTIKEQSDQL
AQSLSAADLLFGNSEWQKAWLQNPEAFRKTLTDFARQWQENTEKLHQLERQESAQKAECE
SLASFLPSLEKQAEEAGQFHEKNHIAFSSLQAQRKKLLDGRPADSVEQEYTRRMEELKER
LKKLSATQTEQSGIADQTRGIADQIAKDLDEASADLLRRKVALDKWTAGYLASSDGQPLE
ATLLRFTQEKTELAFRLRTQTENKAKVSGLQEELNVRRTESERWAKLNELAGSADGAKFR
RIAQGYTLDILLNYANVQLRCLTRRYRLERVPETLALQVIDRDMCDEVRTVHSLSGGESF
LVSLALALGLSSLSSNRMRVESLFIDEGFGSLDAETLRVAMDALESLRTQGRKIGVISHV
QEMTERIPVRICVNRAGNGRSFLEVL
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgaagatattagcgatacgaggtcgtaacctggcctcgctggaaggtgattttgaaata
gactttacagtagagccgttgctctcggccgggatctttgccatttccggacctacggga
gctggcaagtccacgcttttggatgcgatgtgcttggctctgttcgcccgtacgcctcgt
accgatcaagcaaaagaaaataatgtcaagcttcaggatgtcagtaatgaacaactgtcg
cagagcgatccccgtttcttgctgcggcgggggacggcttctggttttgcagaggtggat
ttcatggccttgaacggacaccgctaccggacacgctggtcggtggcgcgggcgcgtgac
aaggaaaacggacggttgcagaatccgcgtctggcgttgtacaacctcgacaaggaggag
gaagagcaggggacgcgttccgatctgcaagcccgtatcatcgaactgatcggcctgacc
ttcgaacagtttacgcgttccgtattgctggcgcagaacgatttttccactttcttgaaa
gccgagcagggagaaaaagcctccttgttggagaagttgaccggaaccgagctttattct
gctatttcccgccagatatttgaaagaaatgcgcgggcgaaagatgccttcgacttgatc
caatcacgcatacaaggcattgagctattgacggatgaggaagaaaacgacttgcgcact
cgtcttgcccaagcggagaaagaatcgcagcggatcgagaaagcgaaagcggagcagcag
gctcttcaagaggctgtccgctctgtcgaacagcagatttctgtccgccggaggcagcaa
aaagaggctgccgacaagttggtgcacgcaacggaattgttgttggttgctcgccgtgaa
tacgaaaagggagtggaggagcagcaacagtccgaagctcgttttaaatctcttcaacag
gagatattgcaggcgcgtaaactggatatccagttggatacggccatccgcgacttgtca
cattcggagcagcagttgaagaatgttacgcttcggaaggaagatgccgaaaagaaatat
caggctgccgtcctccgtcaaaagcagggggcggaggagatggtccgtctggctgcttgg
cgcgagcgttataagaagaaggaacgtattgcggagcagctttcagccttgttgttgcac
ttggatgcagcatcggtcgcccgttcggggatggaagcggccactcgttcgatcgaaacg
ctccagcaggaggttgtggcgttgaataaacaacttgccgctctgcaacaggcgaatgca
aacaaacagcaggcgttgaaacgggcggaagaggagtatcggaacctggaagaagaactg
aaagctgtcgatgcaccggctttagacaaacagattgagaaacttcgccaggaacgagaa
caattgcttatcgaacaggcacgcttggaggcttccggcaacataaaggatttgcgcggc
aggttacaggaagggcaaccctgtccggtttgcgggagtacacatcatccttttgcccat
caggcacccgtcgcccctgtttctgccctcacccttcaattgcaggctttatcggataaa
aaagaaacctacatcgcccatactcgccatcttgcccgtctgcaacagcagttgcttcaa
ctccataaagaacttgcagatagcgaggctgcctgtaaggagatgatcggcaagcaacaa
ctcgccgccagccggcaagagagggaagaagtcactataaaagaacaatccgaccagttg
gctcagtccctttcggctgccgacctcttgttcggcaatagcgaatggcagaaagcatgg
ttgcagaatccggaagcctttcgtaaaacattgacagactttgcccgtcagtggcaggaa
aataccgagaaacttcatcagttggaacggcaggagagcgcccaaaaagccgaatgcgaa
tctcttgcttcttttcttccttctctcgaaaagcaagcggaagaagccggacagttccac
gaaaagaaccatatcgctttttcctctttacaggcgcagcgaaagaaactactcgacggc
cgccccgcagatagtgtggagcaggagtacacccggcgaatggaagaactgaaggaacgt
ctgaaaaaactgtcggctacccagaccgagcaatccggcatcgccgaccagacgcgtggc
attgccgaccagatcgcaaaggacttggatgaagcttctgccgacctactccggagaaag
gtggctttagataaatggactgccggctacttggcttcttctgatggacagccactcgaa
gcaaccctgctccgctttacgcaggaaaagacggaacttgctttccggcttcgtacccag
acggagaacaaggcgaaagtttccggtctacaggaagaattgaatgtccggcgtacggaa
agcgaacgttgggcgaagctgaacgaattggccggttctgccgatggcgccaagttccgt
cgcatagcgcaaggatatacgcttgatattctgttgaactatgccaatgtgcaattgcgt
tgcttgacaaggcgttatcggctggaacgggttcccgaaacgcttgccttgcaggtgatc
gaccgggatatgtgtgatgaggtgcgtaccgttcatagcctttcggggggcgaatcgttc
cttgtttcgctggcacttgcgctcggtttgtcttctctttcatccaaccggatgagggtc
gaaagcctttttatcgacgaaggtttcgggtccttggatgccgagacgcttcgtgtggcg
atggatgctttggaaagtttgcggacgcagggacgcaagatcggtgtcatctcgcatgtg
caggaaatgactgagcgcatccccgtccgcatctgtgtgaaccgcgccggcaatggacgc
agctttcttgaagttttgtaa
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