KEGG   Parabacteroides johnsonii: LK449_09780
Entry
LK449_09780       CDS       T07907                                 
Name
(GenBank) helix-turn-helix domain-containing protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
pjo  Parabacteroides johnsonii
Brite
KEGG Orthology (KO) [BR:pjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pjo03000]
    LK449_09780
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pjo02048]
    LK449_09780
Transcription factors [BR:pjo03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    LK449_09780
Prokaryotic defense system [BR:pjo02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    LK449_09780
SSDB
Motif
Pfam: HTH_3 HTH_26 HTH_31 HTH_19 HTH_24 HTH_23 YdaS_toxin DNA_pol3_delta_C Sigma70_r4_2 HTH_37 HTH_28 HTH_7
Other DBs
NCBI-ProteinID: UEA92485
LinkDB
Position
2403438..2403800
AA seq 120 aa
MNKITKEQYEFALARVEELLPLVNDNIPTNDKNAVELTVMSDIVIAYEKEHFPIKKPTIA
ELIELSLEEKGMSQKQLAGEIGISPSRVNDFVSGRSEPTLKIARLLCQILNIPPAAMLGF
NT seq 363 nt   +upstreamnt  +downstreamnt
atgaataaaataacaaaagaacaatatgaatttgcgttggcaagagtggaagaacttctg
cctttggtcaatgacaatattcctacaaacgataagaatgcagtggagctcaccgtcatg
tccgatatagtaatcgcatacgagaaggaacacttccctataaaaaaaccaacaatcgct
gaactgatcgagctttcccttgaagaaaaagggatgagccaaaaacagcttgccggggag
atcggaataagcccttcacgagtgaatgattttgtttccggacgttcagaaccgacttta
aagatagcgagattgctttgccaaatattgaacatacctcctgctgccatgttaggcttt
tga

DBGET integrated database retrieval system