Parabacteroides johnsonii: LK449_10270
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Entry
LK449_10270 CDS
T07907
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pjo
Parabacteroides johnsonii
Pathway
pjo00550
Peptidoglycan biosynthesis
pjo01100
Metabolic pathways
pjo01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LK449_10270 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LK449_10270 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pjo01011
]
LK449_10270 (mrdA)
Enzymes [BR:
pjo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LK449_10270 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pjo01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LK449_10270 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UEA88954
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All DBs
Position
complement(2509954..2511831)
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AA seq
625 aa
AA seq
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MEINTKYTLENRRFVIGGAVVLLVLIFIIRLFFLQVVDSDYKAWADSNAFQKKTLIPSRG
IIYDRNGKLLVYNQPSYEVMLIMREIQPFDTLDFCNILGITKELFVKRIAEIKNRRLNPG
YSSYVPQVFMNHLSAQECGVLQEKLYKFPGFYIQNRTIREYEYPYGAHLLGNIGEVNRGD
IEKDPYYVQGDNAGRSGVELSYEEALRGVKGVEILLRDAHGRIKGRYEEGRHDVAPVSGK
NLTLSIDMDLQALGEKLMQNKRGSIVMIEPETGEVLCMVSSPSYDPNLLVGRQRGKNHIM
LSKNSDKPLLDRAIMGRYPPGSTFKPTQALTFLQEGVITTETMYTCAHGYTGARNGKPAC
HGHASPLNVTYALATSCNSFFCWGLRDMIDSRRRYPSVGEAFEVWKNYLVSMGYGYKLGI
DLPGENRGFLPNSEYYDKYHGKRWSSSTVISIAIGQGEVLATPLQICNLAATIANRGYFI
TPHVVKEVQDTPLDSLYTDKRYTMVNRENYEIVAEGMRNAVIGGTCRGVAIPDIEVCGKT
GTAENPHGKDHSAFIGFAPYRNPKVAICVYVENGGFGATYGVPIGKLMMEKYLKGEISEE
NKLLEETMSNAVVSPNVLSLPNREL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
gtggagattaatacgaagtatactcttgagaacaggcgtttcgtgattggtggcgccgtc
gttctgctggttctcatctttatcattcgtctattcttcctgcaagtggtggatagcgac
tataaagcatgggcggacagcaatgcgtttcagaaaaagacactgatcccttccagaggg
atcatttatgaccgcaacgggaaattgctggtctataaccagccttcttatgaagtcatg
ctgatcatgcgtgagattcaaccgttcgatacacttgatttctgcaatatccttggtatt
acaaaagaattgtttgtaaaacgtatagccgaaattaagaacaggcgattgaatcctgga
tattcatcctatgtcccgcaggtgtttatgaatcacctctccgcacaggaatgcggcgtt
ttgcaggaaaagttgtataaatttcccggtttttatattcagaaccgtacgatccgggaa
tatgaatatccttatggagcccatctgttgggtaatatcggggaggttaaccggggggat
atcgaaaaagatccctattatgtgcagggagataatgccggacgttcaggcgtggaattg
tcttacgaagaggctttacgtggtgtgaaaggagtggagatcttgttgcgtgatgcgcat
ggacgtataaaaggaaggtatgaagaaggccgtcacgatgtggctcccgtgtccggtaag
aacctgacgctttcgattgatatggatttgcaagctttgggtgagaagctgatgcagaac
aagagaggcagcattgtcatgatcgagccggaaacgggagaggtactgtgcatggtttct
tcgccttcttacgacccaaacttgttagtcggccgtcagcggggaaagaatcatatcatg
ctttcgaaaaattcagacaagcctttgttggatcgtgccatcatgggacgttatccgcca
ggatcgacattcaagccgacacaggcgttgactttccttcaagaaggagtgattacgact
gaaactatgtacacttgtgcacatggatatacaggagcccgaaatggcaaaccggcctgt
catggccatgcatctcctctaaatgtgacctatgcgctggctacttcctgtaactctttt
ttttgttgggggttgcgggatatgatcgatagccgccggcgttatccgagcgtgggagag
gcgtttgaagtctggaagaactacctggtgtctatgggatacggctataagttgggcatt
gacctgcctggggaaaatagaggttttttgccgaacagtgaatattatgacaaatatcat
ggtaaacgttggagctccagtactgtcatctccattgcgatcgggcagggtgaagtgttg
gctacgccattgcagatttgtaatctggcggcgaccatcgctaaccggggatattttatt
actccgcatgtcgtgaaggaggtgcaggacaccccgttggattccctttacacggataaa
cggtacacgatggtgaatcgcgaaaattatgaaatcgttgctgaaggtatgcggaatgcc
gttataggtggcacttgccgaggggtggctattccggatattgaggtctgcggcaagact
ggtacagctgagaatccgcatgggaaagatcactcggcttttatcggttttgctccttat
cggaatccgaaggtggccatttgcgtatatgtggagaatggtggttttggtgcgacttac
ggtgtgccgatcggcaagttgatgatggagaagtatctgaaaggcgagatctcggaagag
aacaagttgctggaagagacaatgtcaaatgcggttgtatcgccaaacgttttatcttta
ccgaatcgtgagttatag
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