Parabacteroides johnsonii: LK449_11720
Help
Entry
LK449_11720 CDS
T07907
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pjo
Parabacteroides johnsonii
Pathway
pjo00300
Lysine biosynthesis
pjo00470
D-Amino acid metabolism
pjo01100
Metabolic pathways
pjo01110
Biosynthesis of secondary metabolites
pjo01120
Microbial metabolism in diverse environments
pjo01230
Biosynthesis of amino acids
Module
pjo_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
pjo_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LK449_11720 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LK449_11720 (lysA)
Enzymes [BR:
pjo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LK449_11720 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UEA89232
LinkDB
All DBs
Position
2860610..2861770
Genome browser
AA seq
386 aa
AA seq
DB search
MILKGTFPIEKFKSLETPFYFYDIKLLKETLNMVKTEAGKYGYHAHYAVKANANPRILSV
IAEYGLGADCVSGGEIQAALDAGFPACKIVYAGVGKADWEINLGLDNDIFCFNVESAAEL
EILDELAAAKNKVAPIALRINPEVDAHTHAKITTGMKENKFGINLSQLGQVLDLVSHLEH
IKLIGIHCHIGSQITDMAAFRGLVIRVNEIQEELEARGIKVENLNFGGGLGIDYYHPNHL
PIPAFDNYFAVFNKLLQLRPGQQVHFEPGRSIVAQCGSLISKVLYVKVGETKKFCILDAG
FTELIRPAMYDAYHRMENITSDEEVEVYDVVGPICESSDVFGKDVELNRAHRGDLIALRS
AGAYGEVMASQYNCRKLPVAYYSDML
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatattaaaaggtacatttcctatagaaaagttcaaatcactggaaactcccttctat
ttttacgatataaagctgctgaaagaaacgctcaatatggtgaaaacggaagccggaaag
tatggctatcatgcccactatgcagtcaaggcgaacgctaatccccgtatcttgtctgtt
atcgctgaatacggcctgggagccgattgtgtgagtggcggtgaaatacaggctgcactc
gatgcaggtttccctgcctgcaaaatcgtttatgccggtgtcggcaaagcagattgggag
atcaacttagggctggacaacgatattttctgcttcaacgtagaatcggctgccgaattg
gaaatcctggacgaactggctgccgccaaaaacaaagtagccccgatcgccctccgtatc
aacccggaagtagatgctcatacacatgccaagattacaaccggcatgaaggaaaacaaa
ttcggtatcaacctgagtcagctcggacaggtgttggacttggtcagccacctggaacat
attaaactgatcggcatccattgccatatcggttcacagattacagacatggctgctttc
cgtggcttggtaatccgtgtcaatgaaattcaggaagaactggaagcgcgtggaataaaa
gttgagaatctgaatttcggtggtggtctcggaatcgattactatcacccgaatcatttg
cctatcccggcattcgacaactattttgccgtattcaacaaactgttgcaacttcgtccg
ggacagcaagttcatttcgagccgggacgttccatcgtcgcacaatgtggttcgctaatt
tctaaagtgctgtatgtgaaagtcggtgaaacgaagaaattctgtattttagacgccggc
ttcaccgagctgatccgcccggccatgtacgacgcataccaccgcatggaaaatatcacc
agcgacgaagaagttgaagtttatgacgttgtcggcccgatctgcgaatcgtccgacgta
ttcggtaaagatgtcgaactgaaccgtgcccatcgtggcgacctgatcgccctccgttcc
gcaggcgcttacggcgaagtgatggcttcgcaatataactgccggaagttgccagtggct
tattattcggatatgctataa
DBGET
integrated database retrieval system