KEGG   Parabacteroides johnsonii: LK449_12470
Entry
LK449_12470       CDS       T07907                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
pjo  Parabacteroides johnsonii
Pathway
pjo02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pjo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LK449_12470
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pjo02022]
    LK449_12470
Two-component system [BR:pjo02022]
 NtrC family
  HydH-HydG (metal tolerance)
   LK449_12470
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_2 HTH_28 HTH_23 HTH_20 AAA HTH_7 HTH_50 CENP-B_N EcKL HTH_3 HTH_17 HTH_29 HTH_30 Xre-like-HTH RELT
Other DBs
NCBI-ProteinID: UEA89366
LinkDB
Position
3041640..3042941
AA seq 433 aa
MGKIIVVEDNLVYSGYVCNFLKENGYRTVSTLDCAGARKLFATMDDDDIVLADLKLPDGD
GIKLLEELRRQGKRNPCVIMTDYAEVSTAVRSMKSGAEDYIPKKLLTSQLPAMLQDLQKR
QSFHEEPLFMRESEAYQKVFGRLHILAKADICVMIRGENGTGKKHIAEKIHAQSDRADKP
FVTVDCGLLSENLAASALFGHEKGAFTGAVGRKEGYWAEAEGGTLFLDEIGNLPLGVQQM
LLCAIQDKRYRPVGGTKDRKANVRIITATNENLEEAISEKRFRRDLYFRLSEYTVTVPPL
RECPDDILPLAEFFRELYNQEHGRQVKGFDAEAKKRLLAHDWPGNVRELKQVVQSAVLFA
QGEMVTAEDLNLEEAEKPSDPDVTLKGEEMERIRICQALEKAGHNRKETARLLGISRSTL
YEKMDLYGIQTKK
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgggaaagattatcgtagtggaagacaacctcgtgtacagcgggtatgtctgcaatttt
ttgaaagaaaacggataccggacagtgagcaccttagattgcgcgggtgcccgaaagtta
tttgccacgatggacgatgacgacatcgtgcttgccgacctgaagctgcccgacggcgac
ggcatcaagctgttggaggaactgcgccgacagggaaagcgcaatccctgcgtcatcatg
acggattatgcggaagtgtccaccgccgtgcgctccatgaaatccggggcggaagactat
atccccaagaaactgctgaccagccagcttcccgccatgctccaagacttgcagaaaagg
cagtcgttccatgaggaacccctgttcatgagggaaagcgaagcttaccagaaagtattc
gggcgtctccacatcctggccaaagccgacatctgcgtgatgatccggggtgaaaacgga
accgggaagaaacacatcgcggagaagatacatgcccagagcgaccgtgcggacaaacca
tttgtgacggtggactgcgggttgctttccgagaacctggccgcttccgccctgttcggg
catgaaaagggggcttttaccggagcggtcgggcgcaaggaaggctattgggcggaagcc
gagggcggcacgttgttcctggatgagataggcaaccttcccctcggcgtgcagcagatg
ctgctctgcgccatacaggacaagcgctaccgcccggtcggcggtacaaaagaccggaaa
gccaacgtgcgcatcatcaccgcaacgaatgagaatctggaagaagccatatctgaaaag
cgtttccgccgggacttgtatttccggctgagtgaatacaccgtgacagtgcccccgctc
agggaatgcccggatgacatcctgccgcttgccgaattcttccgggaactttacaaccaa
gaacatggcaggcaggtaaaaggttttgatgcggaggcgaagaaacggctgctggcccat
gactggccgggaaacgtgagggaattgaaacaggtggtccaatccgccgtgctctttgcc
caaggggagatggtgactgcggaggacttgaacttggaggaagcggaaaagccttccgac
cctgacgttactttgaaaggggaagagatggaaaggatacggatatgccaggctttggaa
aaggccgggcataaccggaaagagaccgccaggctgcttggcataagccggagcacgttg
tacgagaaaatggatctgtatgggattcagacgaagaagtga

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