Parabacteroides johnsonii: LK449_12480
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Entry
LK449_12480 CDS
T07907
Name
(GenBank) putative DNA binding domain-containing protein
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
pjo
Parabacteroides johnsonii
Pathway
pjo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LK449_12480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pjo03400
]
LK449_12480
Enzymes [BR:
pjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LK449_12480
DNA repair and recombination proteins [BR:
pjo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LK449_12480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_4
Fic-like_C
SLFN_AlbA_2
HTH_45
Motif
Other DBs
NCBI-ProteinID:
UEA89367
LinkDB
All DBs
Position
3043973..3045436
Genome browser
AA seq
487 aa
AA seq
DB search
MNITHIDDISKLASGDEGRRTEYKQTTGQLERGMETLCAFLNGEGGTVLFGVKDNGKIIG
QEVSDKTKREIAEAIRQIEPFATIKVSYISIPDTNKQVIALYAEEQRYMRPFTYKGRAYQ
RIESVTSVMSQDKYNHLLMQRGGKYSWEAMPNPDLQISDLDENAIIGAVRAGISCGRLPE
TTIREEIPVILEKFDLLHDGKLNNAAAVLFGRNLYDYPQCLLRMARFRGTTKEEFMDNQR
LQGNIYALLDAAMSFFFKHLSLSGKIEGLYREEKLSIPYKALRECCINAFCHRAYHRPGG
SVGIAIYDDRVEIESSGAFPPDMTLEKLLGGHSSEPPNLIIANVLYKSELLESWGRGIRL
MIDECHRAGIPDPEFHTDGSSVWVIFRYKRETPEQAPDKHPTSTRQVPDKYPTSIVRLIE
LIGEHTCSLKEMMGMMELKDRENFLGNYLNPSMEAGLVEPLYPNQPKHPKQKYRLTEQGK
ALLERSE
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaatataacccatatagacgatataagcaaactggcctccggcgatgaagggagacgg
acagaatacaagcagaccaccgggcagttggagcgcggcatggaaacattgtgcgccttc
ctcaacggcgagggcggcacggtgctgttcggtgtcaaggacaacgggaaaatcatcggt
caggaggtgagcgacaagacgaaacgggaaatagcggaagccatccgccagattgagcca
tttgccacgataaaggtctcatacataagtattcccgacacgaacaagcaagtcattgcc
ttatatgcggaggaacaacgctatatgcgcccattcacgtacaaaggcagggcttaccag
cggatagaaagtgtgacatccgtcatgtcgcaggacaagtacaaccacctgctgatgcaa
aggggcggcaaatacagttgggaggcgatgcccaatcccgacctgcaaatcagcgacctc
gacgagaatgccatcatcggcgcggtacgtgccggaatcagctgcggacgcttgccggaa
accactatccgagaggaaataccagtcattcttgaaaaattcgacctgctgcatgacggg
aagctgaacaatgccgctgccgtgctgttcgggcgcaatctgtacgactatccccaatgc
ctgttgcgaatggcaaggtttaggggtacgaccaaagaggaattcatggacaaccaacgc
ctgcaagggaacatttacgcgttgttggacgccgccatgtcgttctttttcaagcacctg
tccttgtcgggaaaaatagaggggctgtaccgtgaagaaaagctgagcatcccatacaag
gcattaagggagtgttgtatcaacgccttttgtcacagggcctaccaccgtccgggtggt
tcggtgggcatcgccatttatgacgatcgtgtggaaatagagagcagcggcgcgtttcct
cccgacatgacccttgaaaaactgcttggcggacacagttcagagccccccaacctcatc
atagccaacgtgctttacaagagcgaactgttggagagctgggggcgcggcattagactg
atgatagacgagtgccatcgtgcaggcatacccgacccggaatttcacacggacggaagt
tccgtatgggtgattttccgttacaagagggaaacgccagaacaagcacccgacaagcac
ccgacaagtacccgacaagtgcccgacaagtacccgacaagcatcgtccggctcattgaa
ctgataggggaacacacctgctcgctgaaagaaatgatgggaatgatggaactgaaagac
agggagaatttcttgggcaattaccttaacccgtctatggaagccggattggtggaaccg
ctctatccgaaccagccgaaacatcccaaacagaagtatcgactcaccgaacaggggaaa
gctttgctggagaggagtgagtaa
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